[Swift-user] coasters problem on teraport

Mihael Hategan hategan at mcs.anl.gov
Thu Apr 2 15:15:10 CDT 2009


Swift cannot properly guess your client machine's address.

Do export GLOBUS_HOSTNAME=your.address.or.ip before invoking swift.

On Thu, 2009-04-02 at 15:06 -0500, Glen Hocky wrote:
> I get the following error trying to run on teraport w/ coasters
> > Progress:  Submitting:4 Failed:1 Finished successfully:10
> > Execution failed:
> >         Exception in runoops:
> > Arguments: [input/fasta/T1dcj.fasta, 
> > home/ghocks/oops/swift/output/teraportoutdir.1/T1dcj/T1dcj.ST10.TU10.0000.secseq, 
> > input/native/T1dcj.pdb, 
> > home/ghocks/oops/swift/output/teraportoutdir.1/T1dcj//ST10.TU10/0000/00/00/T1dcj.ST10.TU10.0000.0000.pdt, 
> > home/ghocks/oops/swift/output/teraportoutdir.1/T1dcj//ST10.TU10/0000/00/00/T1dcj.ST10.TU10.0000.0000.rmsd, 
> > 0, DEFAULT_INIT_TEMP_=_10, TEMP_UPDATE_INTERVAL_=_10, 
> > MAX_NUMBER_OF_ANNEALING_STEPS_=_0, KILL_TIME_=_30]
> > Host: teraport
> > Directory: oops-20090402-1307-6ud4sy60/jobs/9/runoops-9h3jft8j
> > stderr.txt:
> >
> > stdout.txt:
> >
> > ----
> >
> > Caused by:
> >         Could not submit job
> > Caused by:
> >         Could not start coaster service
> > Caused by:
> >         Cannot submit job
> > Caused by:
> >         The job manager failed to open stderr
> > Cleaning up...
> >  Done
> > Command exited with non-zero status 2
> > real 189.93
> > user 13.20
> > sys 1.94
> With sites files containing:
> > <pool handle="teraport" >
> >   <profile namespace="globus" key="queue">fast</profile>
> >   <profile namespace="globus" 
> > key="coasterWorkerMaxwalltime">01:00:00</profile>
> >   <filesystem provider="coaster" 
> > url="coaster-gt2://tp-grid1.ci.uchicago.edu" />
> >   <execution provider="coaster" url="tp-grid1.ci.uchicago.edu" 
> > jobmanager="gt2:gt2:pbs" />
> >   <workdirectory>/home/hockyg/swiftwork</workdirectory>
> > </pool>
> > <pool handle="teraport" >
> >   <profile namespace="globus" key="queue">fast</profile>
> >   <profile namespace="globus" 
> > key="coasterWorkerMaxwalltime">01:00:00</profile>
> >   <gridftp url="gsiftp://tp-grid1.ci.uchicago.edu" />
> >   <execution provider="coaster" url="tp-grid1.ci.uchicago.edu" 
> > jobmanager="gt2:gt2:pbs" />
> >   <workdirectory>/home/hockyg/swiftwork</workdirectory>
> > </pool>
> 
> 
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