[Swift-user] possible coasters problem

Glen Hocky hockyg at uchicago.edu
Wed Apr 1 13:56:55 CDT 2009


it's
"Swift svn swift-r2788 cog-r2349"


Michael Wilde wrote:
> I think it was run on cog 2349, swift 2787.
>
> com$ svn info cog
> Path: cog
> URL: 
> https://cogkit.svn.sourceforge.net/svnroot/cogkit/trunk/current/src/cog
> Repository Root: https://cogkit.svn.sourceforge.net/svnroot/cogkit
> Repository UUID: 5b74d2a0-fa0e-0410-85ed-ffba77ec0bde
> Revision: 2349
> Node Kind: directory
> Schedule: normal
> Last Changed Author: hategan
> Last Changed Rev: 2349
> Last Changed Date: 2009-03-29 14:58:40 -0500 (Sun, 29 Mar 2009)
>
> com$ svn info cog/modules/swift
> Path: cog/modules/swift
> URL: https://svn.ci.uchicago.edu/svn/vdl2/trunk
> Repository Root: https://svn.ci.uchicago.edu/svn/vdl2
> Repository UUID: e2bb083e-7f23-0410-b3a8-8253ac9ef6d8
> Revision: 2788
> Node Kind: directory
> Schedule: normal
> Last Changed Author: hategan
> Last Changed Rev: 2787
> Last Changed Date: 2009-03-30 19:31:33 -0500 (Mon, 30 Mar 2009)
>
> com$
>
>
> On 4/1/09 10:22 AM, Mihael Hategan wrote:
>> On Tue, 2009-03-31 at 17:40 -0500, Glen Hocky wrote:
>>> Hi Guys,
>>> Do you think this is a problem with coasters or just the way i'm 
>>> using it...
>>
>> It's a problem with coasters.
>>
>> What version of cog/swift is this?
>>
>>> Thanks,
>>> Glen
>>>> Exception in runoops:
>>>> Arguments: [input/fasta/T1ubq.fasta, 
>>>> teraportoutdir.100/T1ubq/T1ubq.ST50.TU200.0000.secseq, 
>>>> input/native/T1ubq.pdb, 
>>>> teraportoutdir.100/T1ubq//ST50.TU200/0000/00/06/T1ubq.ST50.TU200.0000.0006.pdt, 
>>>> teraportoutdir.100/T1ubq//ST50.TU200/0000/00/06/T1ubq.ST50.TU200.0000.0006.rmsd, 
>>>> 6, DEFAULT_INIT_TEMP_=_50, TEMP_UPDATE_INTERVAL_=_200, 
>>>> MAX_NUMBER_OF_ANNEALING_STEPS_=_0, KILL_TIME_=_55]
>>>> Host: teraport
>>>> Directory: oops-20090331-1701-fpuie7be/jobs/d/runoops-dsmccq8j
>>>> stderr.txt:
>>>>
>>>> stdout.txt:
>>>>
>>>> ----
>>>>
>>>> Caused by:
>>>>
>>>> org.globus.cog.abstraction.impl.common.task.TaskSubmissionException: 
>>>> java.lang.IllegalArgumentException: No worker with id=1956306968
>>>> at 
>>>> org.globus.cog.abstraction.coaster.service.job.manager.CoasterTaskHandler.submit(CoasterTaskHandler.java:85) 
>>>>
>>>> at 
>>>> org.globus.cog.abstraction.coaster.service.job.manager.CoasterQueueProcessor.run(CoasterQueueProcessor.java:71) 
>>>>
>>>> Caused by: java.lang.IllegalArgumentException: No worker with 
>>>> id=1956306968
>>>> at 
>>>> org.globus.cog.abstraction.coaster.service.job.manager.WorkerManager.getChannelContext(WorkerManager.java:483) 
>>>>
>>>> at 
>>>> org.globus.cog.abstraction.coaster.service.job.manager.CoasterTaskHandler.submit(CoasterTaskHandler.java:78) 
>>>>
>>>> ... 1 more
>>>>
>>>> Cleaning up...
>>>> Shutting down service at https://128.135.125.118:55513
>>>> Got channel MetaChannel: 22129174 -> GSSSChannel-null(1)
>>>> - Done
>>>> Command exited with non-zero status 2
>>>> real 1628.27
>>>> user 169.87
>>> _______________________________________________
>>> Swift-user mailing list
>>> Swift-user at ci.uchicago.edu
>>> http://mail.ci.uchicago.edu/mailman/listinfo/swift-user
>>
>> _______________________________________________
>> Swift-user mailing list
>> Swift-user at ci.uchicago.edu
>> http://mail.ci.uchicago.edu/mailman/listinfo/swift-user




More information about the Swift-user mailing list