[Swift-devel] resume feature in trunk

[Mihael Hategan]

Yeah, please send me the script or a simplified one. I have been using
resume for a while, so it's not a general resume issue.

Mihael

On Thu, 2013-10-03 at 20:45 -0500, Ketan Maheshwari wrote:
> Hi,
> 
> It seems that the resume feature in trunk has some problems.
> 
> When I try to resume a workflow I am running, I get the following error:
> 
> $ swift -sites.file sites.gordon.xml -tc.file apps -config cf
> workflow.swift -resume workflow-20131004-0107-09cxqmd5.0.rlog
> Swift trunk swift-r7089 cog-r3775 (cog modified locally)
> RunID: 20131004-0142-7l1ym0y9
> Progress:  time: Fri, 04 Oct 2013 01:42:37 +0000
> 
> Execution failed:
> java.lang.IndexOutOfBoundsException: Invalid index [14] for mA_file
> swift:stageIn @ workflow, line: 347
> Caused by: java.lang.IndexOutOfBoundsException: Invalid index [14] for
> mA_file
> at
> org.griphyn.vdl.mapping.AbstractDataNode.checkNoValue(AbstractDataNode.java:716)
> at
> org.griphyn.vdl.mapping.AbstractDataNode.waitFor(AbstractDataNode.java:682)
> at org.griphyn.vdl.karajan.lib.Stagein.function(Stagein.java:81)
> at org.griphyn.vdl.karajan.lib.SwiftFunction.runBody(SwiftFunction.java:108)
> at
> org.globus.cog.karajan.compiled.nodes.InternalFunction.run(InternalFunction.java:155)
> at
> org.globus.cog.karajan.compiled.nodes.CompoundNode.runChild(CompoundNode.java:87)
> at
> org.globus.cog.karajan.compiled.nodes.user.InvocationWrapper.run(InvocationWrapper.java:66)
> at
> org.globus.cog.karajan.compiled.nodes.CompoundNode.runChild(CompoundNode.java:87)
> at org.globus.cog.karajan.compiled.nodes.Sequential.run(Sequential.java:22)
> at
> org.globus.cog.karajan.compiled.nodes.user.Function.runBody(Function.java:99)
> at
> org.globus.cog.karajan.compiled.nodes.user.InvocationWrapper.runBody(InvocationWrapper.java:245)
> at
> org.globus.cog.karajan.compiled.nodes.user.InvocationWrapper.run(InvocationWrapper.java:69)
> at
> org.globus.cog.karajan.compiled.nodes.CompoundNode.runChild(CompoundNode.java:87)
> at org.globus.cog.karajan.compiled.nodes.Sequential.run(Sequential.java:22)
> at
> org.globus.cog.karajan.compiled.nodes.CompoundNode.runChild(CompoundNode.java:87)
> at org.globus.cog.karajan.compiled.nodes.UParallel$1.run(UParallel.java:68)
> at k.thr.LWThread.run(LWThread.java:228)
> at
> java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1145)
> at
> java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:615)
> at java.lang.Thread.run(Thread.java:724)
> 
> I am trying to reproduce with a simpler example.
> 
> Thanks,
> Hi,
> 
> 
> It seems that the resume feature in trunk has some problems.
> 
> 
> When I try to resume a workflow I am running, I get the following
> error:
> 
> 
> $ swift -sites.file sites.gordon.xml -tc.file apps -config cf
> workflow.swift -resume workflow-20131004-0107-09cxqmd5.0.rlog
> Swift trunk swift-r7089 cog-r3775 (cog modified locally)
> RunID: 20131004-0142-7l1ym0y9
> Progress:  time: Fri, 04 Oct 2013 01:42:37 +0000
> 
> 
> Execution failed:
> java.lang.IndexOutOfBoundsException: Invalid index [14] for mA_file
> swift:stageIn @ workflow, line: 347
> Caused by: java.lang.IndexOutOfBoundsException: Invalid index [14] for
> mA_file
> at
> org.griphyn.vdl.mapping.AbstractDataNode.checkNoValue(AbstractDataNode.java:716)
> at
> org.griphyn.vdl.mapping.AbstractDataNode.waitFor(AbstractDataNode.java:682)
> at org.griphyn.vdl.karajan.lib.Stagein.function(Stagein.java:81)
> at
> org.griphyn.vdl.karajan.lib.SwiftFunction.runBody(SwiftFunction.java:108)
> at
> org.globus.cog.karajan.compiled.nodes.InternalFunction.run(InternalFunction.java:155)
> at
> org.globus.cog.karajan.compiled.nodes.CompoundNode.runChild(CompoundNode.java:87)
> at
> org.globus.cog.karajan.compiled.nodes.user.InvocationWrapper.run(InvocationWrapper.java:66)
> at
> org.globus.cog.karajan.compiled.nodes.CompoundNode.runChild(CompoundNode.java:87)
> at
> org.globus.cog.karajan.compiled.nodes.Sequential.run(Sequential.java:22)
> at
> org.globus.cog.karajan.compiled.nodes.user.Function.runBody(Function.java:99)
> at
> org.globus.cog.karajan.compiled.nodes.user.InvocationWrapper.runBody(InvocationWrapper.java:245)
> at
> org.globus.cog.karajan.compiled.nodes.user.InvocationWrapper.run(InvocationWrapper.java:69)
> at
> org.globus.cog.karajan.compiled.nodes.CompoundNode.runChild(CompoundNode.java:87)
> at
> org.globus.cog.karajan.compiled.nodes.Sequential.run(Sequential.java:22)
> at
> org.globus.cog.karajan.compiled.nodes.CompoundNode.runChild(CompoundNode.java:87)
> at org.globus.cog.karajan.compiled.nodes.UParallel
> $1.run(UParallel.java:68)
> at k.thr.LWThread.run(LWThread.java:228)
> at
> java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1145)
> at java.util.concurrent.ThreadPoolExecutor
> $Worker.run(ThreadPoolExecutor.java:615)
> at java.lang.Thread.run(Thread.java:724)
> 
> 
> I am trying to reproduce with a simpler example.
> 
> 
> Thanks,
> -- 
> Ketan
> 
> 
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