[Swift-devel] Please help: error "
Justin M Wozniak
wozniak at mcs.anl.gov
Sat Jun 15 23:30:16 CDT 2013
Ok, I will try it.
On 6/15/2013 7:06 PM, Michael Wilde wrote:
> Wonderful, that fixes it - thanks very much!
>
> Justin, my swift on midway is now updated with this fix, and is the best Swift to use there for Sundays demos.
>
> $ cat ./set-swift
> PATH=/project/wilde/swift/src/0.94/cog/modules/swift/dist/swift-svn/bin:$PATH
>
> - Mike
>
>
> ----- Original Message -----
>> From: "Mihael Hategan" <hategan at mcs.anl.gov>
>> To: "Michael Wilde" <wilde at mcs.anl.gov>
>> Cc: "Swift Devel" <swift-devel at ci.uchicago.edu>, "David Kelly" <davidk at ci.uchicago.edu>
>> Sent: Saturday, June 15, 2013 6:49:32 PM
>> Subject: Re: [Swift-devel] Please help: error "
>>
>> This should now be fixed in SVN. Thanks David for the hint about the
>> coaster service change being at the root of the problem.
>>
>> Mihael
>>
>> On Sat, 2013-06-15 at 08:58 -0500, Michael Wilde wrote:
>>> I sent this help request because I thought it was causing the demo
>>> runs to fail.
>>>
>>> When David tested, he noted that the error was *not* causing any
>>> failures.
>>>
>>> Testing now, I too see that the demo now seems to be working.
>>>
>>> Its possible that I was misled by some other aspect of the run(s) I
>>> did.
>>>
>>> So we should fix this, and verify what the impact is, but for now I
>>> *think* its OK.
>>>
>>> My command line, output, dir on midway, and sites.xml is below.
>>>
>>> The log for this runs is at
>>> http://www.ci.uchicago.edu/~wilde/atlas01-20130615-1355-z6imink0.log
>>>
>>> Thanks,
>>>
>>> - Mike
>>>
>>> swift$ swift -tc.file apps.midway -sites.file t.xml atlas01.swift
>>> Swift 0.94 swift-r6549 cog-r3672 (cog modified locally)
>>>
>>> RunID: 20130615-1355-z6imink0
>>> Progress: time: Sat, 15 Jun 2013 13:55:47 +0000
>>> Failed to configure log file name
>>> Progress: time: Sat, 15 Jun 2013 13:55:52 +0000 Stage in:1
>>> Submitted:3
>>> Progress: time: Sat, 15 Jun 2013 13:55:53 +0000 Stage in:3
>>> Active:1
>>> Final status: Sat, 15 Jun 2013 13:55:54 +0000 Finished
>>> successfully:4
>>> swift$ pwd
>>> /home/wilde/Projects/OHBM2013/svn-mcs
>>> swift$ cat t.xml
>>> <config>
>>>
>>> <pool handle="localhost">
>>> <execution provider="local"/>
>>> <profile namespace="karajan" key="initialScore">10000</profile>
>>> <filesystem provider="local"/>
>>> <workdirectory>/scratch/midway/{env.USER}/swiftwork</workdirectory>
>>> <profile namespace="swift" key="stagingMethod">file</profile>
>>> <profile namespace="karajan" key="jobThrottle">.03</profile>
>>> <!-- eg .11 -> 12 -->
>>> </pool>
>>>
>>> <pool handle="midway">
>>> <execution provider="coaster" jobmanager="local:slurm"/>
>>>
>>> <!-- Set partition and account here: -->
>>> <profile namespace="globus" key="queue">westmere</profile>
>>> <profile namespace="globus" key="ppn">12</profile>
>>> <!-- <profile namespace="globus"
>>> key="project">pi-wilde</profile> -->
>>>
>>> <!-- Set number of jobs and nodes per job here: -->
>>> <profile namespace="globus" key="slots">1</profile>
>>> <profile namespace="globus" key="maxnodes">1</profile>
>>> <profile namespace="globus" key="nodegranularity">1</profile>
>>> <profile namespace="globus" key="jobsPerNode">12</profile> <!--
>>> apps per node! -->
>>> <profile namespace="karajan" key="jobThrottle">.11</profile>
>>> <!-- eg .11 -> 12 -->
>>>
>>> <!-- Set estimated app time (maxwalltime) and requested job
>>> time (maxtime) here: -->
>>> <profile namespace="globus"
>>> key="maxWalltime">00:15:00</profile>
>>> <profile namespace="globus" key="maxtime">1800</profile> <!--
>>> in seconds! -->
>>>
>>> <!-- Set data staging model and work dir here: -->
>>> <filesystem provider="local"/>
>>> <workdirectory>/scratch/midway/{env.USER}/swiftwork</workdirectory>
>>>
>>> <!-- Typically leave these constant: -->
>>> <profile namespace="globus"
>>> key="slurm.exclusive">false</profile>
>>> <profile namespace="globus"
>>> key="highOverAllocation">100</profile>
>>> <profile namespace="globus"
>>> key="lowOverAllocation">100</profile>
>>> <profile namespace="karajan" key="initialScore">10000</profile>
>>> </pool>
>>>
>>> </config>
>>> swift$
>>>
>>> ----- Original Message -----
>>>> From: "Mihael Hategan" <hategan at mcs.anl.gov>
>>>> To: "David Kelly" <davidk at ci.uchicago.edu>
>>>> Cc: "Swift Devel" <swift-devel at ci.uchicago.edu>, "Michael Wilde"
>>>> <wilde at mcs.anl.gov>
>>>> Sent: Saturday, June 15, 2013 3:47:04 AM
>>>> Subject: Re: [Swift-devel] Please help: error "
>>>>
>>>> The change you mention was meant to re-name the coaster log file
>>>> to
>>>> something containing the date rather than just coasters.log.
>>>>
>>>> It did just occur to me that this might happen when using coaster
>>>> local:x. Is that what's happening? In other words, what's in
>>>> sites.xml
>>>> for the run that prints this error?
>>>>
>>>> Mihael
>>>>
>>>> PS: the run should just continue and there should be no stack
>>>> trace
>>>> (as
>>>> David points out).
>>>>
>>>> On Fri, 2013-06-14 at 16:36 -0500, David Kelly wrote:
>>>>> I think this is related to some changes in CoasterService.java
>>>>> last
>>>>> week. A version of Swift from a few weeks ago with the same
>>>>> scripts/setup doesn't produce this message. Swift seems to
>>>>> continue
>>>>> running after this, and I don't see a stack trace.
>>>>>
>>>>> ----- Original Message -----
>>>>>
>>>>>> From: "Mihael Hategan" <hategan at mcs.anl.gov>
>>>>>> To: "Michael Wilde" <wilde at mcs.anl.gov>
>>>>>> Cc: "Swift Devel" <swift-devel at ci.uchicago.edu>
>>>>>> Sent: Friday, June 14, 2013 4:28:56 PM
>>>>>> Subject: Re: [Swift-devel] Please help: error "
>>>>>> Probably a custom log4j in your classpath that does not have
>>>>>> a
>>>>>> file
>>>>>> appender.
>>>>>> Is there a stack trace?
>>>>>> Mihael
>>>>>> On Fri, 2013-06-14 at 14:57 -0500, Michael Wilde wrote:
>>>>>>> Hi All,
>>>>>>>
>>>>>>> Can anyone help me find the cause of the error below:
>>>>>>> "Failed
>>>>>>> to
>>>>>>> configure log file name"
>>>>>>>
>>>>>>> Ive never seen this before.
>>>>>>>
>>>>>>> Im getting it on midway: swift.rcc.uchicago.edu, dir
>>>>>>> /home/wilde/Projects/OHBM2013/svn:
>>>>>>>
>>>>>>> swift$ swift -config swift.properties -tc.file apps.midway
>>>>>>> genatlas.swift -d=data_2
>>>>>>> Swift 0.94 swift-r6549 cog-r3672 (cog modified locally)
>>>>>>>
>>>>>>> RunID: 20130614-1954-66k4nvfe
>>>>>>> Progress: time: Fri, 14 Jun 2013 19:55:01 +0000
>>>>>>> Failed to configure log file name
>>>>>>>
>>>>>>> Thanks!
>>>>>>>
>>>>>>> - Mike
>>>>>>> _______________________________________________
>>>>>>> Swift-devel mailing list
>>>>>>> Swift-devel at ci.uchicago.edu
>>>>>>> https://lists.ci.uchicago.edu/cgi-bin/mailman/listinfo/swift-devel
>>>>>> _______________________________________________
>>>>>> Swift-devel mailing list
>>>>>> Swift-devel at ci.uchicago.edu
>>>>>> https://lists.ci.uchicago.edu/cgi-bin/mailman/listinfo/swift-devel
>>>>> I think this is related to some changes in CoasterService.java
>>>>> last
>>>>> week. A version of Swift from a few weeks ago with the same
>>>>> scripts/setup doesn't produce this message. Swift seems to
>>>>> continue
>>>>> running after this, and I don't see a stack trace.
>>>>>
>>>>>
>>>>> ______________________________________________________________________
>>>>> From: "Mihael Hategan" <hategan at mcs.anl.gov>
>>>>> To: "Michael Wilde" <wilde at mcs.anl.gov>
>>>>> Cc: "Swift Devel" <swift-devel at ci.uchicago.edu>
>>>>> Sent: Friday, June 14, 2013 4:28:56 PM
>>>>> Subject: Re: [Swift-devel] Please help: error "
>>>>>
>>>>> Probably a custom log4j in your classpath that does not
>>>>> have a
>>>>> file
>>>>> appender.
>>>>>
>>>>> Is there a stack trace?
>>>>>
>>>>> Mihael
>>>>>
>>>>> On Fri, 2013-06-14 at 14:57 -0500, Michael Wilde wrote:
>>>>> > Hi All,
>>>>> >
>>>>> > Can anyone help me find the cause of the error below:
>>>>> "Failed to configure log file name"
>>>>> >
>>>>> > Ive never seen this before.
>>>>> >
>>>>> > Im getting it on midway: swift.rcc.uchicago.edu,
>>>>> dir /home/wilde/Projects/OHBM2013/svn:
>>>>> >
>>>>> > swift$ swift -config swift.properties -tc.file
>>>>> > apps.midway
>>>>> genatlas.swift -d=data_2
>>>>> > Swift 0.94 swift-r6549 cog-r3672 (cog modified
>>>>> > locally)
>>>>> >
>>>>> > RunID: 20130614-1954-66k4nvfe
>>>>> > Progress: time: Fri, 14 Jun 2013 19:55:01 +0000
>>>>> > Failed to configure log file name
>>>>> >
>>>>> > Thanks!
>>>>> >
>>>>> > - Mike
>>>>> > _______________________________________________
>>>>> > Swift-devel mailing list
>>>>> > Swift-devel at ci.uchicago.edu
>>>>> >
>>>>> https://lists.ci.uchicago.edu/cgi-bin/mailman/listinfo/swift-devel
>>>>>
>>>>>
>>>>> _______________________________________________
>>>>> Swift-devel mailing list
>>>>> Swift-devel at ci.uchicago.edu
>>>>> https://lists.ci.uchicago.edu/cgi-bin/mailman/listinfo/swift-devel
>>>>>
>>>>>
>>>>
>>>>
>>
>>
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