[Swift-devel] Please help: error "

Michael Wilde wilde at mcs.anl.gov
Sat Jun 15 08:58:39 CDT 2013


I sent this help request because I thought it was causing the demo runs to fail.

When David tested, he noted that the error was *not* causing any failures.

Testing now, I too see that the demo now seems to be working.

Its possible that I was misled by some other aspect of the run(s) I did.

So we should fix this, and verify what the impact is, but for now I *think* its OK.

My command line, output, dir on midway, and sites.xml is below.

The log for this runs is at http://www.ci.uchicago.edu/~wilde/atlas01-20130615-1355-z6imink0.log

Thanks,

- Mike

swift$ swift -tc.file apps.midway -sites.file t.xml atlas01.swift
Swift 0.94 swift-r6549 cog-r3672 (cog modified locally)

RunID: 20130615-1355-z6imink0
Progress:  time: Sat, 15 Jun 2013 13:55:47 +0000
Failed to configure log file name
Progress:  time: Sat, 15 Jun 2013 13:55:52 +0000  Stage in:1  Submitted:3
Progress:  time: Sat, 15 Jun 2013 13:55:53 +0000  Stage in:3  Active:1
Final status: Sat, 15 Jun 2013 13:55:54 +0000  Finished successfully:4
swift$ pwd
/home/wilde/Projects/OHBM2013/svn-mcs
swift$ cat t.xml
<config>

  <pool handle="localhost">
    <execution provider="local"/>
    <profile namespace="karajan" key="initialScore">10000</profile>
    <filesystem provider="local"/>
    <workdirectory>/scratch/midway/{env.USER}/swiftwork</workdirectory>
    <profile namespace="swift" key="stagingMethod">file</profile>
    <profile namespace="karajan" key="jobThrottle">.03</profile> <!-- eg .11 -> 12 -->
  </pool>

  <pool handle="midway">
    <execution provider="coaster" jobmanager="local:slurm"/>

    <!-- Set partition and account here: -->
    <profile namespace="globus" key="queue">westmere</profile>
    <profile namespace="globus" key="ppn">12</profile>
    <!-- <profile namespace="globus" key="project">pi-wilde</profile> -->

    <!-- Set number of jobs and nodes per job here: -->
    <profile namespace="globus" key="slots">1</profile>
    <profile namespace="globus" key="maxnodes">1</profile>
    <profile namespace="globus" key="nodegranularity">1</profile>
    <profile namespace="globus" key="jobsPerNode">12</profile> <!-- apps per node! -->
    <profile namespace="karajan" key="jobThrottle">.11</profile> <!-- eg .11 -> 12 -->

    <!-- Set estimated app time (maxwalltime) and requested job time (maxtime) here: -->
    <profile namespace="globus" key="maxWalltime">00:15:00</profile>
    <profile namespace="globus" key="maxtime">1800</profile>  <!-- in seconds! -->

    <!-- Set data staging model and work dir here: -->
    <filesystem provider="local"/>
    <workdirectory>/scratch/midway/{env.USER}/swiftwork</workdirectory>

    <!-- Typically leave these constant: -->
    <profile namespace="globus" key="slurm.exclusive">false</profile>
    <profile namespace="globus" key="highOverAllocation">100</profile>
    <profile namespace="globus" key="lowOverAllocation">100</profile>
    <profile namespace="karajan" key="initialScore">10000</profile>
  </pool>

</config>
swift$ 

----- Original Message -----
> From: "Mihael Hategan" <hategan at mcs.anl.gov>
> To: "David Kelly" <davidk at ci.uchicago.edu>
> Cc: "Swift Devel" <swift-devel at ci.uchicago.edu>, "Michael Wilde" <wilde at mcs.anl.gov>
> Sent: Saturday, June 15, 2013 3:47:04 AM
> Subject: Re: [Swift-devel] Please help: error "
> 
> The change you mention was meant to re-name the coaster log file to
> something containing the date rather than just coasters.log.
> 
> It did just occur to me that this might happen when using coaster
> local:x. Is that what's happening? In other words, what's in
> sites.xml
> for the run that prints this error?
> 
> Mihael
> 
> PS: the run should just continue and there should be no stack trace
> (as
> David points out).
> 
> On Fri, 2013-06-14 at 16:36 -0500, David Kelly wrote:
> > I think this is related to some changes in CoasterService.java last
> > week. A version of Swift from a few weeks ago with the same
> > scripts/setup doesn't produce this message. Swift seems to continue
> > running after this, and I don't see a stack trace.
> > 
> > ----- Original Message -----
> > 
> > > From: "Mihael Hategan" <hategan at mcs.anl.gov>
> > > To: "Michael Wilde" <wilde at mcs.anl.gov>
> > > Cc: "Swift Devel" <swift-devel at ci.uchicago.edu>
> > > Sent: Friday, June 14, 2013 4:28:56 PM
> > > Subject: Re: [Swift-devel] Please help: error "
> > 
> > > Probably a custom log4j in your classpath that does not have a
> > > file
> > > appender.
> > 
> > > Is there a stack trace?
> > 
> > > Mihael
> > 
> > > On Fri, 2013-06-14 at 14:57 -0500, Michael Wilde wrote:
> > > > Hi All,
> > > >
> > > > Can anyone help me find the cause of the error below: "Failed
> > > > to
> > > > configure log file name"
> > > >
> > > > Ive never seen this before.
> > > >
> > > > Im getting it on midway: swift.rcc.uchicago.edu, dir
> > > > /home/wilde/Projects/OHBM2013/svn:
> > > >
> > > > swift$ swift -config swift.properties -tc.file apps.midway
> > > > genatlas.swift -d=data_2
> > > > Swift 0.94 swift-r6549 cog-r3672 (cog modified locally)
> > > >
> > > > RunID: 20130614-1954-66k4nvfe
> > > > Progress: time: Fri, 14 Jun 2013 19:55:01 +0000
> > > > Failed to configure log file name
> > > >
> > > > Thanks!
> > > >
> > > > - Mike
> > > > _______________________________________________
> > > > Swift-devel mailing list
> > > > Swift-devel at ci.uchicago.edu
> > > > https://lists.ci.uchicago.edu/cgi-bin/mailman/listinfo/swift-devel
> > 
> > > _______________________________________________
> > > Swift-devel mailing list
> > > Swift-devel at ci.uchicago.edu
> > > https://lists.ci.uchicago.edu/cgi-bin/mailman/listinfo/swift-devel
> > I think this is related to some changes in CoasterService.java last
> > week. A version of Swift from a few weeks ago with the same
> > scripts/setup doesn't produce this message. Swift seems to continue
> > running after this, and I don't see a stack trace.
> > 
> > 
> > ______________________________________________________________________
> >         From: "Mihael Hategan" <hategan at mcs.anl.gov>
> >         To: "Michael Wilde" <wilde at mcs.anl.gov>
> >         Cc: "Swift Devel" <swift-devel at ci.uchicago.edu>
> >         Sent: Friday, June 14, 2013 4:28:56 PM
> >         Subject: Re: [Swift-devel] Please help: error "
> >         
> >         Probably a custom log4j in your classpath that does not
> >         have a
> >         file
> >         appender.
> >         
> >         Is there a stack trace?
> >         
> >         Mihael
> >         
> >         On Fri, 2013-06-14 at 14:57 -0500, Michael Wilde wrote:
> >         > Hi All,
> >         > 
> >         > Can anyone help me find the cause of the error below:
> >         "Failed to configure log file name"
> >         > 
> >         > Ive never seen this before.
> >         > 
> >         > Im getting it on midway: swift.rcc.uchicago.edu,
> >         dir /home/wilde/Projects/OHBM2013/svn:
> >         > 
> >         > swift$ swift -config swift.properties -tc.file
> >         > apps.midway
> >         genatlas.swift -d=data_2
> >         > Swift 0.94 swift-r6549 cog-r3672 (cog modified locally)
> >         > 
> >         > RunID: 20130614-1954-66k4nvfe
> >         > Progress:  time: Fri, 14 Jun 2013 19:55:01 +0000
> >         > Failed to configure log file name
> >         > 
> >         > Thanks!
> >         > 
> >         > - Mike
> >         > _______________________________________________
> >         > Swift-devel mailing list
> >         > Swift-devel at ci.uchicago.edu
> >         >
> >         https://lists.ci.uchicago.edu/cgi-bin/mailman/listinfo/swift-devel
> >         
> >         
> >         _______________________________________________
> >         Swift-devel mailing list
> >         Swift-devel at ci.uchicago.edu
> >         https://lists.ci.uchicago.edu/cgi-bin/mailman/listinfo/swift-devel
> > 
> > 
> 
> 
> 



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