[Swift-devel] trunk execution fails with absolute path

Mihael Hategan hategan at mcs.anl.gov
Sat Aug 31 14:56:09 CDT 2013


The ticker should not be fixed.

Mihael

On Thu, 2013-08-29 at 14:59 -0500, Ketan Maheshwari wrote:
> Hi Mihael,
> 
> This works now. Just a note that I see status ticker showing every second
> instead of every 30 seconds.
> 
> Thanks,
> Ketan
> 
> 
> On Tue, Aug 27, 2013 at 8:50 PM, Mihael Hategan <hategan at mcs.anl.gov> wrote:
> 
> > Should be fixed now. Please give it a try and let me know if it works.
> >
> > On Mon, 2013-08-26 at 20:31 -0500, Ketan Maheshwari wrote:
> > > Just a note that I tested the same configuration with 0.94 which works.
> > >
> > >
> > > On Mon, Aug 26, 2013 at 8:28 PM, Ketan Maheshwari <
> > > ketancmaheshwari at gmail.com> wrote:
> > >
> > > > Hi,
> > > >
> > > > I notice the execution fails in trunk when providing absolute path for
> > a
> > > > file. I tested this with a catsn example. When providing relative
> > path, it
> > > > works. The mode is coasters, local:slurm on midway.
> > > >
> > > > Error message is as follows:
> > > >
> > > > Execution failed:
> > > > Exception in cat:
> > > >     Arguments:
> > > >
> > [__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/data.txt]
> > > >     Host: midway
> > > >     Directory: catsn-20130827-0122-c0vppi56/jobs/d/cat-dpf6fdel
> > > >     exception @ swift-int-staging.k, line: 159
> > > > Caused by: Job failed with and exit code of 1
> > > > org.globus.cog.abstraction.impl.common.execution.JobException: Job
> > failed
> > > > with and exit code of 1 (exit code: 1)
> > > >     at
> > > >
> > org.globus.cog.abstraction.coaster.service.local.JobStatusHandler.requestComplete(JobStatusHandler.java:40)
> > > >     at
> > > >
> > org.globus.cog.coaster.handlers.RequestHandler.receiveCompleted(RequestHandler.java:88)
> > > >     at
> > > >
> > org.globus.cog.coaster.channels.AbstractCoasterChannel.handleRequest(AbstractCoasterChannel.java:527)
> > > >     at
> > > >
> > org.globus.cog.coaster.channels.AbstractStreamCoasterChannel.stepNIO(AbstractStreamCoasterChannel.java:238)
> > > >     at
> > > >
> > org.globus.cog.coaster.channels.NIOMultiplexer.loop(NIOMultiplexer.java:97)
> > > >     at
> > > >
> > org.globus.cog.coaster.channels.NIOMultiplexer.run(NIOMultiplexer.java:56)
> > > >
> > > > Caused by:
> > org.globus.cog.abstraction.impl.common.execution.JobException:
> > > > Job failed with and exit code of 1
> > > > org.globus.cog.abstraction.impl.common.execution.JobException: Job
> > failed
> > > > with and exit code of 1 (exit code: 1)
> > > >     at
> > > >
> > org.globus.cog.abstraction.coaster.service.local.JobStatusHandler.requestComplete(JobStatusHandler.java:40)
> > > >     at
> > > >
> > org.globus.cog.coaster.handlers.RequestHandler.receiveCompleted(RequestHandler.java:88)
> > > >     at
> > > >
> > org.globus.cog.coaster.channels.AbstractCoasterChannel.handleRequest(AbstractCoasterChannel.java:527)
> > > >     at
> > > >
> > org.globus.cog.coaster.channels.AbstractStreamCoasterChannel.stepNIO(AbstractStreamCoasterChannel.java:238)
> > > >     at
> > > >
> > org.globus.cog.coaster.channels.NIOMultiplexer.loop(NIOMultiplexer.java:97)
> > > >     at
> > > >
> > org.globus.cog.coaster.channels.NIOMultiplexer.run(NIOMultiplexer.java:56)
> > > >
> > > >
> > > > Log for this run is:
> > > > http://www.mcs.anl.gov/~ketan/absolutepath.log
> > > >
> > > > Thanks for any suggestions on fixing this.
> > > >
> > > > Regards,
> > > > --
> > > > Ketan
> > > >
> > > >
> > >
> > >
> > > Just a note that I tested the same configuration with 0.94 which
> > > works.
> > >
> > >
> > >
> > > On Mon, Aug 26, 2013 at 8:28 PM, Ketan Maheshwari
> > > <ketancmaheshwari at gmail.com> wrote:
> > >         Hi,
> > >
> > >
> > >         I notice the execution fails in trunk when providing absolute
> > >         path for a file. I tested this with a catsn example. When
> > >         providing relative path, it works. The mode is coasters,
> > >         local:slurm on midway.
> > >
> > >
> > >         Error message is as follows:
> > >
> > >         Execution failed:
> > >         Exception in cat:
> > >             Arguments:
> > >
> > [__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/data.txt]
> > >             Host: midway
> > >             Directory:
> > >         catsn-20130827-0122-c0vppi56/jobs/d/cat-dpf6fdel
> > >             exception @ swift-int-staging.k, line: 159
> > >         Caused by: Job failed with and exit code of 1
> > >         org.globus.cog.abstraction.impl.common.execution.JobException:
> > >         Job failed with and exit code of 1 (exit code: 1)
> > >             at
> > >
> > org.globus.cog.abstraction.coaster.service.local.JobStatusHandler.requestComplete(JobStatusHandler.java:40)
> > >             at
> > >
> > org.globus.cog.coaster.handlers.RequestHandler.receiveCompleted(RequestHandler.java:88)
> > >             at
> > >
> > org.globus.cog.coaster.channels.AbstractCoasterChannel.handleRequest(AbstractCoasterChannel.java:527)
> > >             at
> > >
> > org.globus.cog.coaster.channels.AbstractStreamCoasterChannel.stepNIO(AbstractStreamCoasterChannel.java:238)
> > >             at
> > >
> > org.globus.cog.coaster.channels.NIOMultiplexer.loop(NIOMultiplexer.java:97)
> > >             at
> > >
> > org.globus.cog.coaster.channels.NIOMultiplexer.run(NIOMultiplexer.java:56)
> > >
> > >         Caused by:
> > >         org.globus.cog.abstraction.impl.common.execution.JobException:
> > >         Job failed with and exit code of 1
> > >         org.globus.cog.abstraction.impl.common.execution.JobException:
> > >         Job failed with and exit code of 1 (exit code: 1)
> > >             at
> > >
> > org.globus.cog.abstraction.coaster.service.local.JobStatusHandler.requestComplete(JobStatusHandler.java:40)
> > >             at
> > >
> > org.globus.cog.coaster.handlers.RequestHandler.receiveCompleted(RequestHandler.java:88)
> > >             at
> > >
> > org.globus.cog.coaster.channels.AbstractCoasterChannel.handleRequest(AbstractCoasterChannel.java:527)
> > >             at
> > >
> > org.globus.cog.coaster.channels.AbstractStreamCoasterChannel.stepNIO(AbstractStreamCoasterChannel.java:238)
> > >             at
> > >
> > org.globus.cog.coaster.channels.NIOMultiplexer.loop(NIOMultiplexer.java:97)
> > >             at
> > >
> > org.globus.cog.coaster.channels.NIOMultiplexer.run(NIOMultiplexer.java:56)
> > >
> > >
> > >
> > >         Log for this run is:
> > >         http://www.mcs.anl.gov/~ketan/absolutepath.log
> > >
> > >
> > >
> > >         Thanks for any suggestions on fixing this.
> > >
> > >
> > >         Regards,
> > >
> > >         --
> > >         Ketan
> > >
> > >
> > >
> > >
> > >
> > > --
> > > Ketan
> > >
> > >
> > > _______________________________________________
> > > Swift-devel mailing list
> > > Swift-devel at ci.uchicago.edu
> > > https://lists.ci.uchicago.edu/cgi-bin/mailman/listinfo/swift-devel
> >
> >
> >
> 
> 
> Hi Mihael,
> 
> 
> This works now. Just a note that I see status ticker showing every
> second instead of every 30 seconds.
> 
> 
> Thanks,
> 
> Ketan
> 
> 
> 
> On Tue, Aug 27, 2013 at 8:50 PM, Mihael Hategan <hategan at mcs.anl.gov>
> wrote:
>         Should be fixed now. Please give it a try and let me know if
>         it works.
>         
>         On Mon, 2013-08-26 at 20:31 -0500, Ketan Maheshwari wrote:
>         > Just a note that I tested the same configuration with 0.94
>         which works.
>         >
>         >
>         > On Mon, Aug 26, 2013 at 8:28 PM, Ketan Maheshwari <
>         > ketancmaheshwari at gmail.com> wrote:
>         >
>         > > Hi,
>         > >
>         > > I notice the execution fails in trunk when providing
>         absolute path for a
>         > > file. I tested this with a catsn example. When providing
>         relative path, it
>         > > works. The mode is coasters, local:slurm on midway.
>         > >
>         > > Error message is as follows:
>         > >
>         > > Execution failed:
>         > > Exception in cat:
>         > >     Arguments:
>         > >
>         [__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/data.txt]
>         > >     Host: midway
>         > >     Directory:
>         catsn-20130827-0122-c0vppi56/jobs/d/cat-dpf6fdel
>         > >     exception @ swift-int-staging.k, line: 159
>         > > Caused by: Job failed with and exit code of 1
>         > >
>         org.globus.cog.abstraction.impl.common.execution.JobException:
>         Job failed
>         > > with and exit code of 1 (exit code: 1)
>         > >     at
>         > >
>         org.globus.cog.abstraction.coaster.service.local.JobStatusHandler.requestComplete(JobStatusHandler.java:40)
>         > >     at
>         > >
>         org.globus.cog.coaster.handlers.RequestHandler.receiveCompleted(RequestHandler.java:88)
>         > >     at
>         > >
>         org.globus.cog.coaster.channels.AbstractCoasterChannel.handleRequest(AbstractCoasterChannel.java:527)
>         > >     at
>         > >
>         org.globus.cog.coaster.channels.AbstractStreamCoasterChannel.stepNIO(AbstractStreamCoasterChannel.java:238)
>         > >     at
>         > >
>         org.globus.cog.coaster.channels.NIOMultiplexer.loop(NIOMultiplexer.java:97)
>         > >     at
>         > >
>         org.globus.cog.coaster.channels.NIOMultiplexer.run(NIOMultiplexer.java:56)
>         > >
>         > > Caused by:
>         org.globus.cog.abstraction.impl.common.execution.JobException:
>         > > Job failed with and exit code of 1
>         > >
>         org.globus.cog.abstraction.impl.common.execution.JobException:
>         Job failed
>         > > with and exit code of 1 (exit code: 1)
>         > >     at
>         > >
>         org.globus.cog.abstraction.coaster.service.local.JobStatusHandler.requestComplete(JobStatusHandler.java:40)
>         > >     at
>         > >
>         org.globus.cog.coaster.handlers.RequestHandler.receiveCompleted(RequestHandler.java:88)
>         > >     at
>         > >
>         org.globus.cog.coaster.channels.AbstractCoasterChannel.handleRequest(AbstractCoasterChannel.java:527)
>         > >     at
>         > >
>         org.globus.cog.coaster.channels.AbstractStreamCoasterChannel.stepNIO(AbstractStreamCoasterChannel.java:238)
>         > >     at
>         > >
>         org.globus.cog.coaster.channels.NIOMultiplexer.loop(NIOMultiplexer.java:97)
>         > >     at
>         > >
>         org.globus.cog.coaster.channels.NIOMultiplexer.run(NIOMultiplexer.java:56)
>         > >
>         > >
>         > > Log for this run is:
>         > > http://www.mcs.anl.gov/~ketan/absolutepath.log
>         > >
>         > > Thanks for any suggestions on fixing this.
>         > >
>         > > Regards,
>         > > --
>         > > Ketan
>         > >
>         > >
>         >
>         >
>         > Just a note that I tested the same configuration with 0.94
>         which
>         > works.
>         >
>         >
>         >
>         > On Mon, Aug 26, 2013 at 8:28 PM, Ketan Maheshwari
>         > <ketancmaheshwari at gmail.com> wrote:
>         >         Hi,
>         >
>         >
>         >         I notice the execution fails in trunk when providing
>         absolute
>         >         path for a file. I tested this with a catsn example.
>         When
>         >         providing relative path, it works. The mode is
>         coasters,
>         >         local:slurm on midway.
>         >
>         >
>         >         Error message is as follows:
>         >
>         >         Execution failed:
>         >         Exception in cat:
>         >             Arguments:
>         >
>         [__root__/scratch/midway/maheshwari/globusonline-galaxy-globus-738fb324c285/tools/swift/data.txt]
>         >             Host: midway
>         >             Directory:
>         >         catsn-20130827-0122-c0vppi56/jobs/d/cat-dpf6fdel
>         >             exception @ swift-int-staging.k, line: 159
>         >         Caused by: Job failed with and exit code of 1
>         >
>         org.globus.cog.abstraction.impl.common.execution.JobException:
>         >         Job failed with and exit code of 1 (exit code: 1)
>         >             at
>         >
>         org.globus.cog.abstraction.coaster.service.local.JobStatusHandler.requestComplete(JobStatusHandler.java:40)
>         >             at
>         >
>         org.globus.cog.coaster.handlers.RequestHandler.receiveCompleted(RequestHandler.java:88)
>         >             at
>         >
>         org.globus.cog.coaster.channels.AbstractCoasterChannel.handleRequest(AbstractCoasterChannel.java:527)
>         >             at
>         >
>         org.globus.cog.coaster.channels.AbstractStreamCoasterChannel.stepNIO(AbstractStreamCoasterChannel.java:238)
>         >             at
>         >
>         org.globus.cog.coaster.channels.NIOMultiplexer.loop(NIOMultiplexer.java:97)
>         >             at
>         >
>         org.globus.cog.coaster.channels.NIOMultiplexer.run(NIOMultiplexer.java:56)
>         >
>         >         Caused by:
>         >
>         org.globus.cog.abstraction.impl.common.execution.JobException:
>         >         Job failed with and exit code of 1
>         >
>         org.globus.cog.abstraction.impl.common.execution.JobException:
>         >         Job failed with and exit code of 1 (exit code: 1)
>         >             at
>         >
>         org.globus.cog.abstraction.coaster.service.local.JobStatusHandler.requestComplete(JobStatusHandler.java:40)
>         >             at
>         >
>         org.globus.cog.coaster.handlers.RequestHandler.receiveCompleted(RequestHandler.java:88)
>         >             at
>         >
>         org.globus.cog.coaster.channels.AbstractCoasterChannel.handleRequest(AbstractCoasterChannel.java:527)
>         >             at
>         >
>         org.globus.cog.coaster.channels.AbstractStreamCoasterChannel.stepNIO(AbstractStreamCoasterChannel.java:238)
>         >             at
>         >
>         org.globus.cog.coaster.channels.NIOMultiplexer.loop(NIOMultiplexer.java:97)
>         >             at
>         >
>         org.globus.cog.coaster.channels.NIOMultiplexer.run(NIOMultiplexer.java:56)
>         >
>         >
>         >
>         >         Log for this run is:
>         >         http://www.mcs.anl.gov/~ketan/absolutepath.log
>         >
>         >
>         >
>         >         Thanks for any suggestions on fixing this.
>         >
>         >
>         >         Regards,
>         >
>         >         --
>         >         Ketan
>         >
>         >
>         >
>         >
>         >
>         > --
>         > Ketan
>         >
>         >
>         
>         > _______________________________________________
>         > Swift-devel mailing list
>         > Swift-devel at ci.uchicago.edu
>         >
>         https://lists.ci.uchicago.edu/cgi-bin/mailman/listinfo/swift-devel
>         
>         
> 
> 
> 
> -- 
> Ketan
> 
> 





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