[Swift-devel] queuedsize > 0 but no job dequeued

Ketan Maheshwari ketancmaheshwari at gmail.com
Thu Sep 1 16:16:09 CDT 2011


Mihael,

That is likely. The walltime is 20 mins and most jobs as far as I know are
less than 10 mins. However, there could be outliers. These are about 120k
jobs.

Ketan

On Thu, Sep 1, 2011 at 1:43 PM, Mihael Hategan <hategan at mcs.anl.gov> wrote:

> Is there any chance that some of your jobs run longer than their
> requested walltime?
>
> On Wed, 2011-08-31 at 09:04 -0500, Ketan Maheshwari wrote:
> > Mihael,
> >
> >
> > I did the run with the debug enabled on coasters. Please find the logs
> > etc, for this run here:
> >
> >
> > http://www.ci.uchicago.edu/~ketan/run25.tgz
> >
> >
> >
> >
> > Note that the run went well and ran upto 20k jobs without issues.
> > After that I did not get nodes so I stopped it and resumed it this
> > morning. It ran for about 1000+ jobs and crashed with the same error
> > message.
> >
> >
> >
> >
> > Regards,
> > Ketan
> >
> > On Tue, Aug 30, 2011 at 3:05 PM, Mihael Hategan <hategan at mcs.anl.gov>
> > wrote:
> >         Any chance you can re-run this with debug enabled on coasters
> >         (log4j.logger.org.globus.cog.abstraction.coaster=DEBUG)?
> >
> >
> >         On Mon, 2011-08-29 at 20:55 -0700, Mihael Hategan wrote:
> >         > My bad. The info is in the swift log.
> >         >
> >         > On Mon, 2011-08-29 at 20:59 -0500, Ketan Maheshwari wrote:
> >         > > This is on Beagle. I am running local:pbs from /lustre.
> >         > >
> >         > > On Mon, Aug 29, 2011 at 8:30 PM, Mihael Hategan
> >         <hategan at mcs.anl.gov>
> >         > > wrote:
> >         > >         On Mon, 2011-08-29 at 19:52 -0500, Ketan
> >         Maheshwari wrote:
> >         > >         > Mihael,
> >         > >         >
> >         > >         >
> >         > >         > This run was with automatic coasters. I do not
> >         see any
> >         > >         specific
> >         > >         > coasters.log file written during this run
> >         in .globus/coaster
> >         > >         nor in
> >         > >         > the run's work dir.
> >         > >
> >         > >
> >         > >         It's on the remote site in .globus/coasters.
> >         > >
> >         > >         >
> >         > >         >
> >         > >         > Ketan
> >         > >         >
> >         > >         > On Mon, Aug 29, 2011 at 7:16 PM, Mihael Hategan
> >         > >         <hategan at mcs.anl.gov>
> >         > >         > wrote:
> >         > >         >         Can I have the coasters log please?
> >         > >         >
> >         > >         >
> >         > >         >         On Sun, 2011-08-28 at 16:47 -0500, Ketan
> >         Maheshwari
> >         > >         wrote:
> >         > >         >         > Hello,
> >         > >         >         >
> >         > >         >         >
> >         > >         >         > I remember this error happened in the
> >         past with
> >         > >         Glen's and
> >         > >         >         Sheri's
> >         > >         >         > runs. I saw this today again on Beagle
> >         with 0.93
> >         > >         while
> >         > >         >         running the
> >         > >         >         > DSSAT run.
> >         > >         >         >
> >         > >         >         >
> >         > >         >         > The run stops with the following
> >         complete message:
> >         > >         >         >
> >         > >         >         >
> >         > >         >         > queuedsize > 0 but no job dequeued.
> >         Queued: {}
> >         > >         >         > java.lang.Throwable
> >         > >         >         >     at
> >         > >         >         >
> >         > >         >
> >         > >
> >
> org.globus.cog.abstraction.coaster.service.job.manager.BlockQueueProcessor.requeueNonFitting(BlockQueueProcessor.java:269)
> >         > >         >         >     at
> >         > >         >         >
> >         > >         >
> >         > >
> >
> org.globus.cog.abstraction.coaster.service.job.manager.BlockQueueProcessor.updatePlan(BlockQueueProcessor.java:539)
> >         > >         >         >     at
> >         > >         >         >
> >         > >         >
> >         > >
> >
> org.globus.cog.abstraction.coaster.service.job.manager.BlockQueueProcessor.run(BlockQueueProcessor.java:110)
> >         > >         >         > queuedsize > 0 but no job dequeued.
> >         Queued: {}
> >         > >         >         > java.lang.Throwable
> >         > >         >         >     at
> >         > >         >         >
> >         > >         >
> >         > >
> >
> org.globus.cog.abstraction.coaster.service.job.manager.BlockQueueProcessor.requeueNonFitting(BlockQueueProcessor.java:269)
> >         > >         >         >     at
> >         > >         >         >
> >         > >         >
> >         > >
> >
> org.globus.cog.abstraction.coaster.service.job.manager.BlockQueueProcessor.updatePlan(BlockQueueProcessor.java:539)
> >         > >         >         >     at
> >         > >         >         >
> >         > >         >
> >         > >
> >
> org.globus.cog.abstraction.coaster.service.job.manager.BlockQueueProcessor.run(BlockQueueProcessor.java:110)
> >         > >         >         > Progress:  time: Sun, 28 Aug 2011
> >         13:34:26 -0600
> >         > >         >          Submitted:76
> >         > >         >         >  Active:23  Checking status:1
> >          Finished
> >         > >         successfully:597
> >         > >         >         >
> >         > >         >         >
> >         > >         >         >
> >         > >         >         >
> >         > >         >         > The logs, properties and sources for
> >         this run are:
> >         > >         >         >
> >         http://www.ci.uchicago.edu/~ketan/run23.tgz
> >         > >         >         >
> >         > >         >         >
> >         > >         >         > Regards,
> >         > >         >         > --
> >         > >         >         > Ketan
> >         > >         >         >
> >         > >         >         >
> >         > >         >         >
> >         > >         >
> >         > >         >         >
> >         _______________________________________________
> >         > >         >         > Swift-devel mailing list
> >         > >         >         > Swift-devel at ci.uchicago.edu
> >         > >         >         >
> >         > >         >
> >         > >
> >
> https://lists.ci.uchicago.edu/cgi-bin/mailman/listinfo/swift-devel
> >         > >         >
> >         > >         >
> >         > >         >
> >         > >         >
> >         > >         >
> >         > >         >
> >         > >         > --
> >         > >         > Ketan
> >         > >         >
> >         > >         >
> >         > >         >
> >         > >
> >         > >
> >         > >
> >         > >
> >         > >
> >         > >
> >         > >
> >         > > --
> >         > > Ketan
> >         > >
> >         > >
> >         >
> >         >
> >         > _______________________________________________
> >         > Swift-devel mailing list
> >         > Swift-devel at ci.uchicago.edu
> >         >
> >
> https://lists.ci.uchicago.edu/cgi-bin/mailman/listinfo/swift-devel
> >
> >
> >
> >
> >
> >
> >
> > --
> > Ketan
> >
> >
> >
>
>
>


-- 
Ketan
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