[Swift-devel] Error while parsing XML

[David Kelly]

I haven't run into this one yet, but I will take a look at this and the other SGE issues tomorrow. Does this happen every time?

David

----- Original Message -----
> From: "Ketan Maheshwari" <ketancmaheshwari at gmail.com>
> To: "Swift Devel" <swift-devel at ci.uchicago.edu>
> Sent: Sunday, November 20, 2011 11:02:02 AM
> Subject: [Swift-devel] Error while parsing XML
> I am seeing this error message at runtime on the SCEC workflow:
> 
> 
> 
> Progress: time: Sun, 20 Nov 2011 10:20:51 -0600 Active:2 Finished
> successfully:4
> [Fatal Error] :-1:-1: Premature end of file.
> org.xml.sax.SAXParseException: Premature end of file.
> at org.apache.xerces.parsers.DOMParser.parse(Unknown Source)
> at org.apache.xerces.jaxp.DocumentBuilderImpl.parse(Unknown Source)
> at javax.xml.parsers.DocumentBuilder.parse(DocumentBuilder.java:124)
> at
> org.globus.cog.abstraction.impl.scheduler.sge.QueuePoller.processStdout(QueuePoller.java:191)
> at
> org.globus.cog.abstraction.impl.scheduler.common.AbstractQueuePoller.pollQueue(AbstractQueuePoller.java:170)
> at
> org.globus.cog.abstraction.impl.scheduler.common.AbstractQueuePoller.run(AbstractQueuePoller.java:82)
> at java.lang.Thread.run(Thread.java:619)
> Progress: time: Sun, 20 Nov 2011 10:21:02 -0600 Active:1 Finished
> successfully:4 Failed but can retry:1
> Exception in simsgt:
> Arguments: [TEST, processed/gridout_TEST, processed/TEST.modelbox,
> processed/TEST.fdloc, processed/TEST.cordfile, x]
> Host: SGE
> Directory: presgt-20111120-0852-n6cze3l8/jobs/d/simsgt-dlogn1jk
> stderr.txt:
> stdout.txt:
> 
> 
> ----
> 
> 
> Caused by: java.io.IOException: Error while parsing XML
> 
> 
> 
> 
> Exception in simsgt:
> Arguments: [TEST, processed/gridout_TEST, processed/TEST.modelbox,
> processed/TEST.fdloc, processed/TEST.cordfile, y]
> Host: SGE
> Directory: presgt-20111120-0852-n6cze3l8/jobs/e/simsgt-elogn1jk
> stderr.txt:
> stdout.txt:
> 
> 
> ----
> 
> 
> Caused by: java.io.IOException: Error while parsing XML
> 
> 
> 
> 
> Final status: time: Sun, 20 Nov 2011 10:21:02 -0600 Failed:2 Finished
> successfully:4
> The following errors have occurred:
> 1. java.io.IOException: Error while parsing XML (2 times)
> 
> 
> 
> 
> The log is:
> http://www.mcs.anl.gov/~ketan/presgt-20111120-0852-n6cze3l8.log
> 
> 
> It shows the same error message at the end of the log. Does anyone
> else see this?
> 
> 
> 
> --
> Ketan
> 
> 
> 
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