[Swift-devel] Swift trunk broken?

Tim Armstrong tim.g.armstrong at gmail.com
Mon Feb 7 16:37:13 CST 2011 

P.S.  I am doing a clean build from the the latest svn versions of swift and
cog

On Mon, Feb 7, 2011 at 4:33 PM, Tim Armstrong <tim.g.armstrong at gmail.com>wrote:

> I've run into a different problem...
>
> Swift fails with the following exception:
>
> Execution failed:
>         java.lang.NullPointerException
>         at org.globus.cog.karajan.Optimizer.optimize0(Optimizer.java:36)
>         at org.globus.cog.karajan.Optimizer.optimize(Optimizer.java:28)
>         at
> org.globus.cog.karajan.util.serialization.XMLConverter.read(XMLConverter.java:207)
>         at
> org.globus.cog.karajan.util.serialization.XMLConverter.read(XMLConverter.java:192)
>         at
> org.globus.cog.karajan.workflow.nodes.ExecuteFile.post(ExecuteFile.java:128)
>
>         at
> org.globus.cog.karajan.workflow.nodes.AbstractSequentialWithArguments.completed(AbstractSequentialWithArguments.java:196)
>         at
> org.globus.cog.karajan.workflow.nodes.ExecuteFile.completed(ExecuteFile.java:155)
>
>         at
> org.globus.cog.karajan.workflow.nodes.FlowNode.complete(FlowNode.java:214)
>         at
> org.globus.cog.karajan.workflow.nodes.FlowContainer.post(FlowContainer.java:58)
>         at
> org.globus.cog.karajan.workflow.nodes.functions.AbstractFunction.post(AbstractFunction.java:28)
>         at
> org.globus.cog.karajan.workflow.nodes.Sequential.startNext(Sequential.java:29)
>         at
> org.globus.cog.karajan.workflow.nodes.Sequential.executeChildren(Sequential.java:20)
>         at
> org.globus.cog.karajan.workflow.nodes.FlowContainer.execute(FlowContainer.java:63)
>         at
> org.globus.cog.karajan.workflow.nodes.FlowNode.restart(FlowNode.java:139)
>         at
> org.globus.cog.karajan.workflow.nodes.FlowNode.start(FlowNode.java:197)
>         at
> org.globus.cog.karajan.workflow.FlowElementWrapper.start(FlowElementWrapper.java:227)
>         at
> org.globus.cog.karajan.workflow.events.EventBus.start(EventBus.java:104)
>         at
> org.globus.cog.karajan.workflow.events.EventTargetPair.run(EventTargetPair.java:40)
>         at
> java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:441)
>         at
> java.util.concurrent.FutureTask$Sync.innerRun(FutureTask.java:303)
>         at java.util.concurrent.FutureTask.run(FutureTask.java:138)
>         at
> java.util.concurrent.ThreadPoolExecutor$Worker.runTask(ThreadPoolExecutor.java:886)
>         at
> java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:908)
>         at java.lang.Thread.run(Thread.java:619)
>
> Time: 0.535, rate: 30624 j/s
>
> Nothing really appears in the logs:
> 2011-02-07 16:32:22,668-0600 DEBUG Loader Loader started
>
>
> - Tim
>
>
>
> On Mon, Feb 7, 2011 at 12:54 PM, Mihael Hategan <hategan at mcs.anl.gov>wrote:
>
>> Should be fixed now.
>>
>> On Mon, 2011-02-07 at 10:03 -0800, Mihael Hategan wrote:
>> > Ooops. I didn't get any emails over the weekend (well, it seems I did,
>> > but my otherwise reliable email notification didn't work). So I'm a bit
>> > behind.
>> >
>> > Mihael
>> >
>> > On Fri, 2011-02-04 at 14:44 -0600, Michael Wilde wrote:
>> > > Im getting strange errors from trunk at the moment from previously
>> working scripts. Seemed to be unable to parse sites.xml.
>> > >
>> > > In the process of debugging this, I find that I cant get the simplest
>> of swift scripts (a single trace statement) to run.
>> > >
>> > > Is anyone else encountering similar problems?
>> > >
>> > > Here's what I get:
>> > >
>> > > com$ cat hi.swift
>> > > trace("hi");
>> > > com$ java -version
>> > > java version "1.6.0_20"
>> > > Java(TM) SE Runtime Environment (build 1.6.0_20-b02)
>> > > Java HotSpot(TM) 64-Bit Server VM (build 16.3-b01, mixed mode)
>> > > com$ swift -version
>> > > Swift svn swift-r4061 cog-r3046
>> > >
>> > > com$ swift hi.swift
>> > > Swift svn swift-r4061 cog-r3046
>> > >
>> > > RunID: 20110204-1439-j430gp9g
>> > > Progress:  time:0
>> > > Execution failed:
>> > >         1 names specified; 0 arguments found
>> > > Time: 1.179, rate: 13896 j/s
>> > > com$ cat hi.xml
>> > > <program xmlns="http://ci.uchicago.edu/swift/2009/02/swiftscript"
>> > >          xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
>> > >          xmlns:xs="http://www.w3.org/2001/XMLSchema">
>> > >   <call proc="trace" src="line 1">
>> > >     <input><stringConstant>hi</stringConstant></input>
>> > >   </call>
>> > > </program>
>> > > com$
>> > >
>> > > com$ cat *9g.log
>> > > 2011-02-04 14:39:29,205-0600 DEBUG Loader Max heap: 238616576
>> > > 2011-02-04 14:39:29,206-0600 DEBUG Loader kmlversion is
>> >a1ce0de8-81e9-4226-987a-0bbcb40af008<
>> > > 2011-02-04 14:39:29,207-0600 DEBUG Loader build version is
>> >a1ce0de8-81e9-4226-987a-0bbcb40af008<
>> > > 2011-02-04 14:39:29,207-0600 DEBUG Loader Recompilation suppressed.
>> > > 2011-02-04 14:39:29,343-0600 INFO  VDL2ExecutionContext Stack dump:
>> > > Level 1
>> > > [iA = 0, iB = 0, bA = false, bB = false]
>> > >         vdl:instanceconfig = Swift configuration []
>> > >         vdl:operation = run
>> > >         swift.home = /home/wilde/swift/rev/trunk/bin/..
>> > >         PATH_SEPARATOR = /
>> > >
>> > >
>> > > 2011-02-04 14:39:29,900-0600 INFO  unknown Using sites file:
>> /home/wilde/swift/rev/trunk/bin/../etc/sites.xml
>> > > 2011-02-04 14:39:29,928-0600 INFO  unknown Using tc.data:
>> /home/wilde/swift/rev/trunk/bin/../etc/tc.data
>> > > 2011-02-04 14:39:30,023-0600 INFO  AbstractScheduler Setting resources
>> to: {localhost=localhost}
>> > > 2011-02-04 14:39:30,468-0600 INFO  unknown Swift svn swift-r4061
>> cog-r3046
>> > >
>> > > 2011-02-04 14:39:30,469-0600 INFO  unknown RUNID
>> id=run:20110204-1439-j430gp9g
>> > > 2011-02-04 14:39:30,511-0600 DEBUG VDL2ExecutionContext 1 names
>> specified; 0 arguments found
>> > > 1 names specified; 0 arguments found
>> > >
>> > >         at
>> org.globus.cog.karajan.workflow.nodes.SetVar.post(SetVar.java:43)
>> > >         at
>> org.globus.cog.karajan.workflow.nodes.AbstractSequentialWithArguments.completed(AbstractSequentialWithArguments.java:196)
>> > >         at
>> org.globus.cog.karajan.workflow.nodes.FlowNode.complete(FlowNode.java:214)
>> > >         at
>> org.globus.cog.karajan.workflow.nodes.FlowContainer.post(FlowContainer.java:58)
>> > >         at
>> org.globus.cog.karajan.workflow.nodes.functions.AbstractFunction.post(AbstractFunction.java:28)
>> > >         at
>> org.globus.cog.karajan.workflow.nodes.Sequential.startNext(Sequential.java:29)
>> > >         at
>> org.globus.cog.karajan.workflow.nodes.Sequential.executeChildren(Sequential.java:20)
>> > >         at
>> org.globus.cog.karajan.workflow.nodes.FlowContainer.execute(FlowContainer.java:63)
>> > >         at
>> org.globus.cog.karajan.workflow.nodes.FlowNode.restart(FlowNode.java:139)
>> > >         at
>> org.globus.cog.karajan.workflow.nodes.FlowNode.start(FlowNode.java:197)
>> > >         at
>> org.globus.cog.karajan.workflow.FlowElementWrapper.start(FlowElementWrapper.java:227)
>> > >         at
>> org.globus.cog.karajan.workflow.events.EventBus.start(EventBus.java:104)
>> > >         at
>> org.globus.cog.karajan.workflow.events.EventTargetPair.run(EventTargetPair.java:40)
>> > >         at
>> java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:441)
>> > >         at
>> java.util.concurrent.FutureTask$Sync.innerRun(FutureTask.java:303)
>> > >         at java.util.concurrent.FutureTask.run(FutureTask.java:138)
>> > >         at
>> java.util.concurrent.ThreadPoolExecutor$Worker.runTask(ThreadPoolExecutor.java:886)
>> > >         at
>> java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:908)
>> > >         at java.lang.Thread.run(Thread.java:619)
>> > > 2011-02-04 14:39:30,522-0600 INFO  ExecutionContext Detailed
>> exception:
>> > > 1 names specified; 0 arguments found
>> > >
>> > >         at
>> org.globus.cog.karajan.workflow.nodes.SetVar.post(SetVar.java:43)
>> > >         at
>> org.globus.cog.karajan.workflow.nodes.AbstractSequentialWithArguments.completed(AbstractSequentialWithArguments.java:196)
>> > >         at
>> org.globus.cog.karajan.workflow.nodes.FlowNode.complete(FlowNode.java:214)
>> > >         at
>> org.globus.cog.karajan.workflow.nodes.FlowContainer.post(FlowContainer.java:58)
>> > >         at
>> org.globus.cog.karajan.workflow.nodes.functions.AbstractFunction.post(AbstractFunction.java:28)
>> > >         at
>> org.globus.cog.karajan.workflow.nodes.Sequential.startNext(Sequential.java:29)
>> > >         at
>> org.globus.cog.karajan.workflow.nodes.Sequential.executeChildren(Sequential.java:20)
>> > >         at
>> org.globus.cog.karajan.workflow.nodes.FlowContainer.execute(FlowContainer.java:63)
>> > >         at
>> org.globus.cog.karajan.workflow.nodes.FlowNode.restart(FlowNode.java:139)
>> > >         at
>> org.globus.cog.karajan.workflow.nodes.FlowNode.start(FlowNode.java:197)
>> > >         at
>> org.globus.cog.karajan.workflow.FlowElementWrapper.start(FlowElementWrapper.java:227)
>> > >         at
>> org.globus.cog.karajan.workflow.events.EventBus.start(EventBus.java:104)
>> > >         at
>> org.globus.cog.karajan.workflow.events.EventTargetPair.run(EventTargetPair.java:40)
>> > >         at
>> java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:441)
>> > >         at
>> java.util.concurrent.FutureTask$Sync.innerRun(FutureTask.java:303)
>> > >         at java.util.concurrent.FutureTask.run(FutureTask.java:138)
>> > >         at
>> java.util.concurrent.ThreadPoolExecutor$Worker.runTask(ThreadPoolExecutor.java:886)
>> > >         at
>> java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:908)
>> > >         at java.lang.Thread.run(Thread.java:619)
>> > > 2011-02-04 14:39:30,522-0600 INFO  Loader Swift finished with errors
>> > > com$
>> > >
>> > >
>> > >
>> >
>> >
>> > _______________________________________________
>> > Swift-devel mailing list
>> > Swift-devel at ci.uchicago.edu
>> > http://mail.ci.uchicago.edu/mailman/listinfo/swift-devel
>>
>>
>> _______________________________________________
>> Swift-devel mailing list
>> Swift-devel at ci.uchicago.edu
>> http://mail.ci.uchicago.edu/mailman/listinfo/swift-devel
>>
>
>
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