[Swift-devel] Swift 0.93 exception on Fusion

[David Kelly]

Two .submit files get created in .globus/scripts: PBS8380254050153377753.submit and PBS5442733515255786709.submit. 

PBS5442733515255786709.submit is empty. I'm guessing this is where the problem is.

PBS8380254050153377753.submit looks ok. There is nothing out of the ordinary in the stderr and stdout files for this. I can resubmit this using qsub and it gets queued without any immediate errors.

Attached a tar file of the PBS files.

David

----- Original Message -----
> From: "Michael Wilde" <wilde at mcs.anl.gov>
> To: "David Kelly" <davidk at ci.uchicago.edu>
> Cc: swift-devel at ci.uchicago.edu
> Sent: Wednesday, August 17, 2011 11:43:38 AM
> Subject: Re: [Swift-devel] Swift 0.93 exception on Fusion
> David, one possibility here is that (automatic) coasters is generating
> an additional job with invalid PBS attributes.
> 
> Can you turn on debug=true in etc/pbs.properties and take a look to
> see if thats the case?
> 
> The NPE is an issue in the pbs/localsched provider, but perhaps caused
> by na unexpected problem or state in the pbs jobs.
> 
> - Mike
> 
> 
> ----- Original Message -----
> > From: "David Kelly" <davidk at ci.uchicago.edu>
> > To: swift-devel at ci.uchicago.edu
> > Sent: Wednesday, August 17, 2011 11:34:06 AM
> > Subject: [Swift-devel] Swift 0.93 exception on Fusion
> > Hello,
> >
> > When testing 0.93 on Fusion, Swift throws an exception. I am running
> > with the catsn script. It runs, creates the output, but then gives
> > this error when cleaning up:
> >
> > Final status: time: Wed, 17 Aug 2011 11:17:38 -0500 Finished
> > successfully:10
> > org.globus.cog.abstraction.impl.common.task.TaskSubmissionException:
> > Cannot submit job
> > at
> > org.globus.cog.abstraction.impl.scheduler.common.AbstractJobSubmissionTaskHandler.submit(AbstractJobSubmissionTaskHandler.java:67)
> > at
> > org.globus.cog.abstraction.impl.common.AbstractTaskHandler.submit(AbstractTaskHandler.java:45)
> > at
> > org.globus.cog.abstraction.impl.common.task.ExecutionTaskHandler.submit(ExecutionTaskHandler.java:57)
> > at
> > org.globus.cog.abstraction.coaster.service.job.manager.LocalQueueProcessor.run(LocalQueueProcessor.java:40)
> > Caused by: java.lang.NullPointerException
> > at
> > org.globus.cog.abstraction.impl.scheduler.pbs.PBSExecutor.makeName(PBSExecutor.java:304)
> > at
> > org.globus.cog.abstraction.impl.scheduler.pbs.PBSExecutor.writeScript(PBSExecutor.java:205)
> > at
> > org.globus.cog.abstraction.impl.scheduler.common.AbstractExecutor.buildCommandLine(AbstractExecutor.java:169)
> > at
> > org.globus.cog.abstraction.impl.scheduler.common.AbstractExecutor.start(AbstractExecutor.java:89)
> > at
> > org.globus.cog.abstraction.impl.scheduler.common.AbstractJobSubmissionTaskHandler.submit(AbstractJobSubmissionTaskHandler.java:53)
> > ... 3 more
> >
> > The config and log files are attached. They can also be found on
> > fusion in ~davidk/temp. This is filed in bugzilla as bug #515.
> >
> > David
> > _______________________________________________
> > Swift-devel mailing list
> > Swift-devel at ci.uchicago.edu
> > https://lists.ci.uchicago.edu/cgi-bin/mailman/listinfo/swift-devel
> 
> --
> Michael Wilde
> Computation Institute, University of Chicago
> Mathematics and Computer Science Division
> Argonne National Laboratory
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