[Swift-devel] ssh:pbs to beagle

[Ketan Maheshwari]

Thanks, I made the change. However, now, I am getting the following on my stderr 


===========
[ketan at bridled catsn.works]$ swift -config cf -tc.file tc -sites.file beagle-coaster-ssh-pbs.xml catsn.swift -n=1
Swift svn swift-r4252 (swift modified locally) cog-r3088 (cog modified locally)

RunID: 20110428-1022-n9s0k0e0
Progress:
 [ketan] 
Progress:  Initializing site shared directory:1
 [ketan] Progress:  Initializing site shared directory:1
Progress:  Initializing site shared directory:1
Progress:  Initializing site shared directory:1
Progress:  Initializing site shared directory:1
Progress:  Initializing site shared directory:1
Progress:  Initializing site shared directory:1
Progress:  Initializing site shared directory:1
Progress:  Initializing site shared directory:1
Progress:  Initializing site shared directory:1
Progress:  Initializing site shared directory:1
Progress:  Initializing site shared directory:1
Progress:  Initializing site shared directory:1
Progress:  Initializing site shared directory:1
========

And from the log it seems some network transmission has failed:

2011-04-28 10:22:45,261-0500 INFO  TransportProtocolCommon Sending SSH_MSG_SERVICE_REQUEST
2011-04-28 10:22:45,264-0500 INFO  TransportProtocolCommon Received SSH_MSG_SERVICE_ACCEPT
2011-04-28 10:24:27,626-0500 INFO  TransportProtocolCommon The Transport Protocol thread failed
java.io.IOException: The socket is EOF
    at com.sshtools.j2ssh.transport.TransportProtocolInputStream.readBufferedData(TransportProtocolInputStream.java:183)
    at com.sshtools.j2ssh.transport.TransportProtocolInputStream.readMessage(TransportProtocolInputStream.java:226)
    at com.sshtools.j2ssh.transport.TransportProtocolCommon.processMessages(TransportProtocolCommon.java:1440)
    at com.sshtools.j2ssh.transport.TransportProtocolCommon.startBinaryPacketProtocol(TransportProtocolCommon.java:1034)
    at com.sshtools.j2ssh.transport.TransportProtocolCommon.run(TransportProtocolCommon.java:393)
    at java.lang.Thread.run(Thread.java:662)


Any clues?
Ketan


On Apr 28, 2011, at 10:20 AM, Michael Wilde wrote:

> The pool name in your sites file is pads-remote-pbs-coasters-ssh but you used pbs in your tc.data.
> 
> - Mike
> 
> ----- Original Message -----
>> Hello,
>> 
>> Some context:
>> I am trying to submit a big run on Beagle using swift + coasters.
>> However, a previous run is already underway on beagle. So, there are
>> two difficulties running a new run from its login node:
>> 
>> 1. Running another swift from the same jvm will result in chaos on the
>> logs (As far as I know, please correct me if this is not the case
>> anymore)
>> 
>> 2. Login node is already under load because of my running previous big
>> run.
>> 
>> /context
>> 
>> So, I am now trying to submit this big run from a remote host
>> (bridled). I know this has been done on PADS using ssh:pbs, provider
>> coaster. I tried the similar approach on a trial swift script but
>> getting error.
>> 
>> Following is the error message:
>> 
>> [ketan at bridled catsn.works]$ swift -config cf -tc.file tc -sites.file
>> beagle-coaster-ssh-pbs.xml catsn.swift -n=1
>> Swift svn swift-r4252 (swift modified locally) cog-r3088 (cog modified
>> locally)
>> 
>> RunID: 20110428-1002-c8rvqhe6
>> Progress:
>> The application "cat" is not available in your tc.data catalog
>> Caused by: org.globus.cog.karajan.scheduler.NoSuchResourceException
>> Final status: Failed:1
>> The following errors have occurred:
>> 1. The application "cat" is not available in your tc.data catalog
>> 
>> 
>> Attached are my .swift, sites.xml and tc.data files.
>> 
>> Could someone indicate if what I am doing is doable and if so how can
>> I correctly configure my sites and tc setup.
>> 
>> Thanks.
>> Ketan
>> 
>> 
>> 
>> 
>> 
>> 
>> 
>> 
>> 
>> _______________________________________________
>> Swift-devel mailing list
>> Swift-devel at ci.uchicago.edu
>> http://mail.ci.uchicago.edu/mailman/listinfo/swift-devel
> 
> -- 
> Michael Wilde
> Computation Institute, University of Chicago
> Mathematics and Computer Science Division
> Argonne National Laboratory
>