[Swift-devel] coasters and java on queen bee

[Sarah Kenny]

awesome, using your sites file it's working...although, weird thing is
it wasn't the java line at all. it looks like it has to do with
specifying the port on the coaster line. i usually don't specify port
for other sites (e.g. abe) but i tried that and it worked. in fact,
even if i remove the PATHPREFIX setting in your sties file it still
works as long as port is specified, if i remove the port specification
it fails as before...not sure how/why the port affects the java
version but that seems to be the case:

<execution provider="coaster" url="grid-qb.loni-lsu.teragrid.org"
jobManager="gt2:gt2:PBS"/>

<execution provider="coaster" url="grid-qb.loni-lsu.teragrid.org:2120"
jobmanager="gt2:gt2:pbs"/>

anyway, it's running...thanks!

~sk

On Wed, Jun 30, 2010 at 11:51 AM,  <wilde at mcs.anl.gov> wrote:
> Yup, job finished, so seems to have basic sanity.
>
> Sites entry is below. I used the SIDGrid TG DBS acct, and my Swift build:
>  /home/wilde/swift/src/stable/cog/modules/swift/dist/swift-svn/bin
>
> - Mike
>
>
>  <pool handle="pbs">
>
>    <execution provider="coaster" url="grid-qb.loni-lsu.teragrid.org:2120" jobmanager="gt2:gt2:pbs"/>
>
>    <profile namespace="globus" key="workersPerNode">8</profile>
>    <profile namespace="globus" key="slots">1</profile>
>    <profile namespace="globus" key="nodeGranularity">1</profile>
>    <profile namespace="globus" key="maxNodes">1</profile>
>    <profile namespace="karajan" key="jobThrottle">.15</profile>
>    <profile namespace="karajan" key="initialScore">10000</profile>
>    <profile namespace="env" key="PATHPPREFIX">/usr/local/compilers/jdk/bin</profile>
>
>    <profile namespace="globus" key="project">TG-DBSACCTHERE</profile>
>
>    <gridftp url="gridftp-qb.loni-lsu.teragrid.org:2811" />
>    <workdirectory>/home/ux454325/swiftwork</workdirectory>
>
>  </pool>
>
>
>
>
> ----- "Sarah Kenny" <skenny at uchicago.edu> wrote:
>
>> yeah, you definitely got further than me if you're in the queue...but
>> i can't replicate this (even when i update to the latest swift) can
>> you post your whole sites and tc files?
>>
>> thanks
>> ~sk
>>
>> On Tue, Jun 29, 2010 at 3:45 PM, Michael Wilde <wilde at mcs.anl.gov>
>> wrote:
>> > I added this line to sites.xml, and now I see a PBS job queued on
>> QueenBee, which I *think* means that the coaster service was able to
>> start:
>> >
>> > <profile namespace="env"
>> key="PATHPPREFIX">/usr/local/compilers/jdk/bin</profile>
>> >
>> > - Mike
>> >
>> >
>> > ----- "Mihael Hategan" <hategan at mcs.anl.gov> wrote:
>> >
>> >> On Tue, 2010-06-29 at 12:32 -0500, wilde at mcs.anl.gov wrote:
>> >> > With my login, globus-job-run gets gcj (see below). When I login
>> to
>> >> QueenBee, my default .soft entries give me Sun Java 1.6.
>> >> >
>> >> > When I use globus-job-run, neither .profile nor .bashrc seems to
>> be
>> >> run (as I placed PATH= statements in both).
>> >> >
>> >> > Mihael, is there any other provision to find the right Java for
>> >> coaster service startup?
>> >>
>> >> The addition of it to PATH should be sufficient as far as I can
>> tell.
>> >>
>> >> I can try to debug it.
>> >>
>> >> Skenny, can you pass me your sites file?
>> >>
>> >> Mihael
>> >
>> > --
>> > Michael Wilde
>> > Computation Institute, University of Chicago
>> > Mathematics and Computer Science Division
>> > Argonne National Laboratory
>> >
>> >
>
> --
> Michael Wilde
> Computation Institute, University of Chicago
> Mathematics and Computer Science Division
> Argonne National Laboratory
>
>