[Swift-devel] SWIFT_JOBDIR_PATH env not passed on remote sites

[Mihael Hategan]

On Fri, 2009-05-08 at 16:37 -0500, Allan Espinosa wrote:
> It works with gt2.  Is this a pbs problem?

It seems so. You should file a bug report.

> 
> Other provider that I am testing that it does not work is on
> provider-deef.  For my purposes, I would like to have it work under
> provider-deef and provider-pbs
> 
> Thanks,
> -Allan
> 
> 2009/5/8 Mihael Hategan <hategan at mcs.anl.gov>:
> > Does it also happen if you use GT2 instead of PBS?
> >
> > On Fri, 2009-05-08 at 15:46 -0500, Allan Espinosa wrote:
> >> Hi,
> >>
> >> SWIFT_JOBDIR_PATH only works in local executions.  it looks like the
> >> environment variable is not being passed for remote job submissions:
> >>
> >> sites.xml:
> >> <config>
> >>   <pool handle="TERAPORT" sysinfo="INTEL32::LINUX">
> >>     <execution provider="pbs" url="none" />
> >>     <profile namespace="globus" key="queue">fast</profile>
> >>     <gridftp url="local://localhost" />
> >>     <workdirectory >/home/aespinosa/workflows/jobdirpath/sitedir</workdirectory>
> >>     <profile namespace="env"
> >> key="SWIFT_JOBDIR_PATH">/home/aespinosa/workflows/localnode</profile>
> >>   </pool>
> >> </config>
> >>
> >> resulting wrapper log:
> >> Progress  2009-05-08 15:33:31.258501000-0500  LOG_START
> >>
> >> _____________________________________________________________________________
> >>
> >>         Wrapper
> >> _____________________________________________________________________________
> >>
> >> Job directory mode is: link on shared filesystem
> >> DIR=jobs/v/cat-vbmpqiaj
> >> EXEC=/bin/cat
> >> STDIN=
> >> STDOUT=061-cattwo.out
> >> STDERR=stderr.txt
> >> DIRS=
> >> INF=061-cattwo.1.in|061-cattwo.2.in
> >> OUTF=061-cattwo.out
> >> KICKSTART=
> >> ARGS=061-cattwo.1.in 061-cattwo.2.in
> >> ARGC=2
> >> Progress  2009-05-08 15:33:31.277785000-0500  CREATE_JOBDIR
> >> Created job directory: jobs/v/cat-vbmpqiaj
> >> Progress  2009-05-08 15:33:31.289956000-0500  CREATE_INPUTDIR
> >> Progress  2009-05-08 15:33:31.294467000-0500  LINK_INPUTS
> >> Linked input: /home/aespinosa/workflows/jobdirpath/sitedir/061-cattwo-20090508-1533-x71gz29g/shared/061-cattwo.1.in
> >> to jobs/v/cat-vbmpqiaj/061-cattwo.1.in
> >> Linked input: /home/aespinosa/workflows/jobdirpath/sitedir/061-cattwo-20090508-1533-x71gz29g/shared/061-cattwo.2.in
> >> to jobs/v/cat-vbmpqiaj/061-cattwo.2.in
> >> Progress  2009-05-08 15:33:31.327217000-0500  EXECUTE
> >> Moving back to workflow directory
> >> /home/aespinosa/workflows/jobdirpath/sitedir/061-cattwo-20090508-1533-x71gz29g
> >> Progress  2009-05-08 15:33:31.338850000-0500  EXECUTE_DONE
> >> Job ran successfully
> >> Progress  2009-05-08 15:33:31.343910000-0500  COPYING_OUTPUTS
> >> Progress  2009-05-08 15:33:31.373251000-0500  RM_JOBDIR
> >> Progress  2009-05-08 15:33:31.383733000-0500  TOUCH_SUCCESS
> >> Progress  2009-05-08 15:33:31.398652000-0500  END
> >>
> >> the directory "localnode" is also not created.  Test peformed using
> >> 061-cattwo.  my testcase script is in ~aespinosa/workflows/jobdirpath
> >>
> >> [aespinosa at tp-login1 jobdirpath]$ ./runtest.sh
> >> Swift svn swift-r2911 cog-r2394
> >>
> >> RunID: remoterun
> >> Progress:  uninitialized:1
> >> Progress:  Active:1
> >> Final status:  Finished successfully:1
> >> Remote test FAIL
> >> Swift svn swift-r2911 cog-r2394
> >>
> >> RunID: localrun
> >> Progress:
> >> Final status:  Finished successfully:1
> >> Local test PASS
> >>
> >> -Allan
> >>
> >>
> >
> >
> >
> 
> 
>