[Swift-devel] Coasters and std's on ranger

[skenny at uchicago.edu]

darn...

Execution failed:
        Exception in RInvoke:
Arguments: [scripts/4reg_dummy.R,
matrices/4_reg/network1/gestspeech.cov, 29, 0.5, speech]
Host: RANGER
Directory:
4reg_speech-20090714-1309-b650zi68/jobs/3/RInvoke-351ksndj
stderr.txt:

stdout.txt:

----

Caused by:
        Block task failed: 0714-090151-000000Block task ended
prematurely

Cleaning up...
Shutting down service at https://129.114.50.163:38571

i can file a bug report with TG if need be, but i'm not quite
sure the best thing to tell them (?) also, i'm wondering how
coasters was previously able to work around this bug? 

~sk


---- Original message ----
>Date: Tue, 14 Jul 2009 10:22:26 -0500
>From: Mihael Hategan <hategan at mcs.anl.gov>  
>Subject: Re: [Swift-devel] Coasters and std's on ranger  
>To: skenny at uchicago.edu
>Cc: swift-devel <swift-devel at ci.uchicago.edu>
>
>On Tue, 2009-07-14 at 10:11 -0500, skenny at uchicago.edu wrote:
>> >I see. What happens is that redirection hasn't been fixed in
>> SGE, but
>> >the commenting out of it in the gt2 provider did nothing
>> because it was
>> >enabled in the coaster provider.
>> 
>> right, i must've misunderstood, i had commented out
>> redirection for the gt2 provider so swift would work for
>> running w/o coasters, but i thought you were saying cog r2430
>> would be also redirecting for coasters as well...but
>> apparently you were trying a different change?
>
>No. As I was mentioning the commenting out I forgot that the
output is
>redirected anyway by the coaster code. So our little
experiment then did
>nothing.
>
>Cog r2430 removed the explicit redirection in the coaster
code. Without
>that and without the hack to always redirect for SGE in the
gt2 provider
>that you commented out, there was no more redirection, so the
SGE job
>manager bug surfaced.
>
>In cog r2431, there's redirection to a file. Do keep the
lines commented
>in the gt2 provider. I'm not sure how that will work out, but
please try
>and let me know.
>