[Swift-devel] Re: misc swift errors

[skenny at uchicago.edu]

so, ben is suggesting that the use of relative paths within
the swift script may be the problem here. 

can you rerun giving the mapper the full path?

string
inputName=@strcat("/disks/gpfs/fmri/cnari/swift/lhROI7_4p2filter_input/sub.",subject,".block",file,".txt");

---- Original message ----
>Date: Fri, 14 Mar 2008 14:53:10 -0500
>From: "Uri Hasson" <uhasson at gmail.com>  
>Subject: Re: misc swift errors  
>To: skenny at uchicago.edu
>
>Hi Sarah,
>
>I'm using the following:
>A swift properties file:
>/disks/gpfs/fmri/cnari/swift/projects/uhasson/peakfit_project/all_runs/run_0314_lhREG7_f4p2/swift.properties
>
>and config files in
>/disks/gpfs/fmri/cnari/swift/projects/uhasson/peakfit_project/swift.conf
>
>
>On Fri, Mar 14, 2008 at 2:51 PM,  <skenny at uchicago.edu> wrote:
>> which config files (tc.data and sites.xml) are you using for
>>  this run?
>>
>>
>>
>>  ---- Original message ----
>>  >Date: Fri, 14 Mar 2008 14:30:35 -0500
>>  >From: "Uri Hasson" <uhasson at gmail.com>
>>  >Subject: misc swift errors
>>  >To: "Sarah Kenny" <skenny at uchicago.edu>, "Mihael Hategan"
>>  <hategan at mcs.anl.gov>
>>  >
>>  >Hey SWIFT gurus.. I'm running swift heavy duty and
>>  encountering some
>>  >errors I can't track.
>>  >
>>  >1) In a log file of a run that's still ongoing there are
>>  errors on
>>  >"status files not" found:
>> 
>/disks/gpfs/fmri/cnari/swift/projects/uhasson/peakfit_project/all_runs/run_0314_lhREG8_f4p2/ccf-perm-wf-20080314-1308-g61h5kic.log
>>  >But the job seems to be continuing...
>>  >
>>  >2) another run simply crashed with errors. Log at:
>> 
>/disks/gpfs/fmri/cnari/swift/projects/uhasson/peakfit_project/all_runs/run_0314_lhREG7_f4p2/ccf-perm-wf-20080314-1006-ix8mnzfb.log
>>  >It sais it can't link to a file that exists..
>>  >
>>  >Any ideas -- much appreciated.
>>  >
>>  >Uri
>>