[Swift-devel] Re: shared filesystem or work directory ?
Zhengxiong Hou
zhengxiongh at uchicago.edu
Tue Dec 23 10:23:42 CST 2008
There is a boring problem on several OSG grid sites. I'm just trying
to solve it.
The returned error information is "No status file was found. Check
the *shared filesystem* on Nebraska. " The "*wrapper.sh*" could NOT be
executed.
In the "vdl-int.k", just "element(initSharedDir, [rhost]" could be
executed. So, in the "wfdir", there were "info, kickstart,
shared,status" directory, and the "wrapper.sh, seq.sh" could also be
transfered to the "shared" directory. But the "jobs", "wrapper.log",
"3", etc. could NOT be created, which should be generated after the
execution of "*wrapper.sh*".
E.g. on Nebraska,
[houzx at login run-by-swift]$ swift -tc.file tc.data -sites.file
site-1-red.xml grid-many-dock6-auto.swift
Swift svn swift-r2377 cog-r2125
RunID: 20081222-1554-9bq3l783
Progress:
rundock started
Sorted: [Nebraska:0.000(1.000):0/1 overload: 0]
Progress: Submitted:1
Progress: Submitted:1
Progress: Submitted:1
Failed to transfer wrapper log from
grid-many-dock6-auto-20081222-1554-9bq3l783/info/7 on Nebraska
rundock failed
Execution failed:
Exception in rundock:
Arguments:
[disks/tp-gpfs/scratch/houzx/dock-run/databases/KEGG_and_Drugs/C10001.mol2,
1F9Y, C10001.mol2-result.tar.gz]
Host: Nebraska
Directory:
grid-many-dock6-auto-20081222-1554-9bq3l783/jobs/7/rundock-7mo1h34j
stderr.txt:
stdout.txt:
----
Caused by:
No status file was found. Check the shared filesystem on Nebraska
Ben Clifford wrote:
> What are you actually trying to do?
>
> Also, ask technical questions on the swift-devel list so the answers get
> archived and searchable.
>
>
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