[Swift-devel] Re: Karajan problem?

[Mihael Hategan]

I'm assuming you see the problem with that.

On Fri, 2007-07-06 at 13:20 -0500, Veronika Nefedova wrote:
> Yes, I am:
> 
> file outfiles <fixed_array_mapper;files="solv_chg.out, solv_disp.out,  
> solv_repu_0_0.2.out, solv_repu_0.2_0.3.out, solv_repu_0.3_0.4.out,  
> solv_repu_0.4_0.5.out, solv_repu_0.5_0.6.out, solv_repu_0.6_0.7.out,  
> solv_repu_0.7_0.8.out, solv_repu_0.8_0.9.out, solv_repu_0.9_1.out">;
> outfiles [0] = CHARMM4 (solv_chg, whaminp, s1, "input:solv_chg");
> <snip>
> 
> 
> On Jul 6, 2007, at 1:18 PM, Mihael Hategan wrote:
> 
> > Are you trying to access a file as an array? As in
> > file x;
> > x[1]
> >
> >
> > On Fri, 2007-07-06 at 12:38 -0500, Veronika Nefedova wrote:
> >> Hi, Mihael:
> >>
> >> I am testing now my new code (with loops and various string
> >> operations!) but I am getting some Karajan errors. I am wondering if
> >> you could point me to a possible reason for these errors? I do not
> >> see any reference to my code so I am not sure where to start  
> >> looking...
> >>
> >> org.griphyn.vdl.mapping.InvalidPathException: Invalid path (1) for
> >> type file
> >> org.griphyn.vdl.mapping.InvalidPathException: Invalid path (1) for
> >> type file
> >> Caused by: org.griphyn.vdl.mapping.InvalidPathException: Invalid path
> >> (1) for type file
> >>          at org.griphyn.vdl.karajan.lib.GetField.function
> >> (GetField.java:33)
> >>          at org.griphyn.vdl.karajan.lib.VDLFunction.post
> >> (VDLFunction.java:58)
> >>          at  
> >> org.globus.cog.karajan.workflow.nodes.Sequential.startNext
> >> (Sequential.java:51)
> >>          at
> >> org.globus.cog.karajan.workflow.nodes.Sequential.executeChildren
> >> (Sequential.java:27)
> >>          at
> >> org.globus.cog.karajan.workflow.nodes.FlowContainer.execute
> >> (FlowContainer.java:63)
> >>          at org.globus.cog.karajan.workflow.nodes.FlowNode.restart
> >> (FlowNode.java:239)
> >>          at org.globus.cog.karajan.workflow.nodes.FlowNode.start
> >> (FlowNode.java:280)
> >>          at
> >> org.globus.cog.karajan.workflow.nodes.FlowNode.controlEvent
> >> (FlowNode.java:392)
> >>          at org.globus.cog.karajan.workflow.nodes.FlowNode.event
> >> (FlowNode.java:331)
> >>          at org.globus.cog.karajan.workflow.FlowElementWrapper.event
> >> (FlowElementWrapper.java:227)
> >>          at org.globus.cog.karajan.workflow.events.EventBus.send
> >> (EventBus.java:123)
> >>          at  
> >> org.globus.cog.karajan.workflow.events.EventBus.sendHooked
> >> (EventBus.java:97)
> >>          at org.globus.cog.karajan.workflow.events.EventWorker.run
> >> (EventWorker.java:69)
> >> Caused by: org.griphyn.vdl.mapping.InvalidPathException: Invalid path
> >> (1) for type file
> >>          at org.griphyn.vdl.mapping.AbstractDataNode.getFields
> >> (AbstractDataNode.java:139)
> >>          at org.griphyn.vdl.mapping.AbstractDataNode.getFields
> >> (AbstractDataNode.java:114)
> >>          at org.griphyn.vdl.karajan.lib.GetField.function
> >> (GetField.java:25)
> >>          ... 12 more
> >> Execution failed:
> >>          org.griphyn.vdl.mapping.InvalidPathException: Invalid path
> >> (1) for type file
> >>
> >>
> >> Thanks!
> >>
> >> Nika
> >>
> >
>