[Swift-commit] r8375 - SwiftApps/ematter/galaxy

[ketan at ci.uchicago.edu]

Author: ketan
Date: 2015-01-23 20:12:38 -0600 (Fri, 23 Jan 2015)
New Revision: 8375

Modified:
   SwiftApps/ematter/galaxy/apps
   SwiftApps/ematter/galaxy/smeagol0.swift
   SwiftApps/ematter/galaxy/smeagol0wrap
   SwiftApps/ematter/galaxy/smeagol_leadwrap
Log:
restore

Modified: SwiftApps/ematter/galaxy/apps
===================================================================
--- SwiftApps/ematter/galaxy/apps	2015-01-21 21:59:32 UTC (rev 8374)
+++ SwiftApps/ematter/galaxy/apps	2015-01-24 02:12:38 UTC (rev 8375)
@@ -18,6 +18,9 @@
 localblues lammps lmp_blues null null null
 localblues lmpwrap /home/ketan/SwiftApps/ematter/galaxy/lmpwrap null null null
 localblues pizzawrap /home/ketan/SwiftApps/ematter/galaxy/pizzawrap null null null
+localblues smeagol_leadwrap /home/ketan/SwiftApps/ematter/galaxy/smeagol_leadwrap null null null
+localblues smeagol0wrap /home/ketan/SwiftApps/ematter/galaxy/smeagol0wrap null null null
+localblues pastawrap /home/ketan/SwiftApps/ematter/galaxy/pastawrap null null null
 localblues smeagol /home/heinonen/smeagol-1.2-Feb-2014/smeagol-1.2_blues/Src/smeagol-1.2_csg null null null
 localblues mpiexec mpiexec null null null
 localblues bash /bin/bash null null null

Modified: SwiftApps/ematter/galaxy/smeagol0.swift
===================================================================
--- SwiftApps/ematter/galaxy/smeagol0.swift	2015-01-21 21:59:32 UTC (rev 8374)
+++ SwiftApps/ematter/galaxy/smeagol0.swift	2015-01-24 02:12:38 UTC (rev 8375)
@@ -27,8 +27,8 @@
 file out <single_file_mapper; file=arg("out")>;
 
 
-(file tio2auhm, file tio2audm, file out) = smeagol0_app (file au3dm, file au3hst, file aupsf,
-                                                         file ausicpsf, file bulklft, file bulkrgt,
-                                                         file inputfdf, file opsf, file osicpsf,
-                                                         file tipsf, file tisicpsf);
+(tio2auhm, tio2audm, out) = smeagol0_app (au3dm, au3hst, aupsf,
+                                                         ausicpsf, bulklft, bulkrgt,
+                                                         inputfdf, opsf, osicpsf,
+                                                         tipsf, tisicpsf);
                                

Modified: SwiftApps/ematter/galaxy/smeagol0wrap
===================================================================
--- SwiftApps/ematter/galaxy/smeagol0wrap	2015-01-21 21:59:32 UTC (rev 8374)
+++ SwiftApps/ematter/galaxy/smeagol0wrap	2015-01-24 02:12:38 UTC (rev 8375)
@@ -71,7 +71,9 @@
 ln -s $tipsf Ti.psf
 ln -s $tisicpsf Ti.sic.psf
 
+export TMPDIR=/tmp/gal1
 mpiexec "/home/heinonen/smeagol-1.2-Feb-2014/smeagol-1.2_blues/Src/smeagol-1.2_csg" < input.fdf > out0.txt;
+rm -rf /tmp/gal1
 
 mv out0.txt $out
 mv TiO2Au.HM $tio2auhm

Modified: SwiftApps/ematter/galaxy/smeagol_leadwrap
===================================================================
--- SwiftApps/ematter/galaxy/smeagol_leadwrap	2015-01-21 21:59:32 UTC (rev 8374)
+++ SwiftApps/ematter/galaxy/smeagol_leadwrap	2015-01-24 02:12:38 UTC (rev 8375)
@@ -60,7 +60,9 @@
 ln -s $tipsf Ti.psf
 ln -s $tisicpsf Ti.sic.psf
 
+export TMPDIR=/tmp/gal
 mpiexec "/home/heinonen/smeagol-1.2-Feb-2014/smeagol-1.2_blues/Src/smeagol-1.2_csg" < input.fdf > out_lead.txt;
+rm -rf /tmp/gal/*
 
 mv out_lead.txt $out
 mv Au3.DM $au3dm