sieve-dev error compiling PETSc-3.1 with Sieve on Blue Gene/L
Shi Jin
jinzishuai at gmail.com
Sun Apr 4 13:52:30 CDT 2010
Hi,
I was recently asked to port my code developed a year ago using
petsc-dev-sieve.
I just checked, the code works without problem on a Linux cluster with
gcc-4.3.2 built against petsc-3.1.0.
However, I got the following error built on the BlueGene. I used the
following steps:
- ./configure —with-clanguage=C++ —with-sieve=1 —with-opt-sieve=1
—download-chaco=1 —download-boost=1 —with-shared=0 —with-debugging=no
—with-mpi-shared=0 —download-f-blas-lapack=1 —with-batch
- cqsub -q debug -n 2 -t 00:10:00 conftest. Make sure the job is finished
by "cqstat".
- ./reconfigure.py
It works fine. The output is
Compilers:
C Compiler: mpicc -Wall -Wwrite-strings -Wno-strict-aliasing -O
C++ Compiler: mpicxx -Wall -Wwrite-strings -Wno-strict-aliasing -O
Fortran Compiler: mpif77 -Wall -Wno-unused-variable -O
Linkers:
Static linker: /usr/bin/ar cr
MPI:
Includes: -I/bgl/BlueLight/V1R3M4_300_2008-080728/ppc/bglsys/include
BLAS/LAPACK: -Wl,-rpath,/home/guntaka/src/petsc-3.1-p0/linux-gnu-cxx-opt/lib
-L/home/guntaka/src/petsc-3.1-p0/linux-gnu-cxx-opt/lib -lflapack
-Wl,-rpath,/home/guntaka/src/petsc-3.1-p0/linux-gnu-cxx-opt/lib
-L/home/guntaka/src/petsc-3.1-p0/linux-gnu-cxx-opt/lib -lfblas
Chaco:
Library: -Wl,-rpath,/home/guntaka/src/petsc-3.1-p0/linux-gnu-cxx-opt/lib
-L/home/guntaka/src/petsc-3.1-p0/linux-gnu-cxx-opt/lib -lchaco
Sieve:
Includes: -I/home/guntaka/src/petsc-3.1-p0/include/sieve
Boost:
Includes: -I/home/guntaka/src/petsc-3.1-p0/externalpackages/Boost/
-I/bgl/BlueLight/V1R3M4_300_2008-080728/ppc/bglsys/include
PETSc:
PETSC_ARCH: linux-gnu-cxx-opt
PETSC_DIR: /home/guntaka/src/petsc-3.1-p0
Clanguage: Cxx
Scalar type: real
Precision: double
shared libraries: disabled
dynamic libraries: disabled
Memory alignment: 16
xxx=========================================================================xxx
Configure stage complete. Now build PETSc libraries with:
make PETSC_DIR=/home/guntaka/src/petsc-3.1-p0
PETSC_ARCH=linux-gnu-cxx-opt all
xxx=========================================================================xxx
Then I moved ahead to build it
make PETSC_DIR=/home/guntaka/src/petsc-3.1-p0 PETSC_ARCH=linux-gnu-cxx-opt all
But I got the following error in compiling sieve:
/home/guntaka/src/petsc-3.1-p0/include/sieve/ALE_args.hh: In member
function `ALE::ArgValue ALE::ArgDB::operator[](const string&) const':
/home/guntaka/src/petsc-3.1-p0/include/sieve/ALE_args.hh:132: error:
call of overloaded `ArgValue(ALE::ArgValue)' is ambiguous
/home/guntaka/src/petsc-3.1-p0/include/sieve/ALE_args.hh:64: note:
candidates are: ALE::ArgValue::ArgValue(const ALE::ArgValue&)
/home/guntaka/src/petsc-3.1-p0/include/sieve/ALE_args.hh:67: note:
ALE::ArgValue::ArgValue(const
boost::program_options::variable_value&)
I am using the mpicxx which is using g++ 3.4.3:
guntaka at fr0103en:~/src/petsc-3.1-p0> mpicxx -show
/bgl/BlueLight/V1R3M4_300_2008-080728/ppc/blrts-gnu/bin/powerpc-bgl-blrts-gnu-g++
-I/bgl/BlueLight/V1R3M4_300_2008-080728/ppc/bglsys/include
-L/bgl/BlueLight/V1R3M4_300_2008-080728/ppc/bglsys/lib -lcxxmpich.rts
-lmpich.rts -L/bgl/BlueLight/V1R3M4_300_2008-080728/ppc/bglsys/lib
-lmsglayer.rts -ldevices.rts -lrts.rts -ldevices.rts -lrts.rts
guntaka at fr0103en:~/src/petsc-3.1-p0>
/bgl/BlueLight/V1R3M4_300_2008-080728/ppc/blrts-gnu/bin/powerpc-bgl-blrts-gnu-g++
--version
I remember there was some issues with older versions of GCC. Not sure
this is the same problem.
Has anyone have any experience on this?
Thank you very much.
Shi
powerpc-bgl-blrts-gnu-g++ (GCC) 3.4.3
/home/guntaka/src/petsc-3.1-p0/include/sieve/ALE_args.hh:132: error:
initializing temporary from result of `ALE::ArgValue::ArgValue(const
boost::program_options::variable_value&)'
--
Shi Jin, Ph.D.
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