[petsc-users] Installing Triangle for PETSc by not using --download
Satish Balay
balay at mcs.anl.gov
Fri Nov 4 12:47:59 CDT 2022
Can you try the --with-packages-download-dir option?
It tells you the URL to download - and then PETSc configure does the install.
Satish
--------
balay at p1 /home/balay/petsc (release =)
$ ./configure --with-packages-download-dir=$HOME/tmp --download-triangle
Download the following packages to /home/balay/tmp
triangle ['git://https://bitbucket.org/petsc/pkg-triangle', 'https://bitbucket.org/petsc/pkg-triangle/get/v1.3-p2.tar.gz']
Then run the script again
balay at p1 /home/balay/petsc (release =)
$ pushd $HOME/tmp
~/tmp ~/petsc
balay at p1 /home/balay/tmp
$ git clone -q https://bitbucket.org/petsc/pkg-triangle
balay at p1 /home/balay/tmp
$ popd
~/petsc
balay at p1 /home/balay/petsc (release =)
$ ./configure --with-packages-download-dir=$HOME/tmp --download-triangle
=============================================================================================
Configuring PETSc to compile on your system
=============================================================================================
=============================================================================================
Running /home/balay/soft/sowing-1.1.26-p1/bin/bfort to generate Fortran stubs
=============================================================================================
=============================================================================================
Trying to download /home/balay/tmp/pkg-triangle for TRIANGLE
=============================================================================================
=============================================================================================
Compiling Triangle; this may take several minutes
=============================================================================================
=============================================================================================
Installing Triangle; this may take several minutes
=============================================================================================
TESTING: checklsame from config.packages.BlasLapack(config/BuildSystem/config/packages/BlasLapack.py:691)
...
..
On Fri, 4 Nov 2022, Mike Michell wrote:
> Hi,
>
> I need to install PETSc and its dependencies to a linux system, which does
> not allow git clone from online. Thus I need to install all the
> dependencies by having their source files. First I downloaded and installed
> all the dependencies by relying on PETSc on my local linux (which means I
> used --download=triangle), then tar all of them, and brought them to the
> cluster.
>
> There is an issue with Triangle. I can do make (or cmake using the
> CMakeList file that Triangle 1.6 provides, although PETSc --download
> provides Triangle 1.3) and can get "libtriangle.a". But during the PETSc
> configure step, it fails with the error message below:
>
> {$Triangle_Home}/build/libtriangle.a(triangle.c.o): In function `poolinit':
> triangle.c:(.text+0x15aa): undefined reference to `PetscTrMalloc'
> {$Triangle_Home}/build/libtriangle.a(triangle.c.o): In function
> `pooldeinit':
> triangle.c:(.text+0x1708): undefined reference to `PetscTrFree'
> ...
>
> It seems that I need to let Triangle know that it will be used by PETSc to
> enable those functions when I install Triangle. Is this correct
> understanding? If so, how can I configure, install, and link Triangle with
> PETSc?
>
> I have seen some PETSc related commands in configure.py in the root
> directory of Triangle downloaded by PETSc, but it is not clear how this
> python script is related or can be used by user like me.
>
> Thanks,
> Mike
>
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