[petsc-users] PETSc 3.15.3 compiling error

Sam Guo sam.guo at cd-adapco.com
Wed Sep 1 14:19:53 CDT 2021 

If we go back to the original compiling error,
"petsc/src/mat/impls/aij/mpi/mumps/mumps.c:52:31: error: missing binary
operator before token "("
   52 | #if PETSC_PKG_MUMPS_VERSION_GE(5,3,0)"
I don't understand what PETSC_PKG_MUMPS_VERSION_GE(5,3,0) is doing.

On Wed, Sep 1, 2021 at 12:12 PM Sam Guo <sam.guo at cd-adapco.com> wrote:

> I believe I am using MUMPS since I have done following
> (1) defined  -DPETSC_HAVE_MUMPS,
> (2) compiles and links mat/impls/aij/mpi/mumps/mumps.c
> (3) link my pre-compiled MUMPS, and
> (4) specifies following PETSc options
>        checkError(EPSGetST(eps, &st));
>         checkError(STSetType(st, STSINVERT));
>         //if(useShellMatrix) checkError(STSetMatMode(st,
> ST_MATMODE_SHELL));
>         checkError(STGetKSP(st, &ksp));
>         checkError(KSPSetOperators(ksp, A, A));
>         checkError(KSPSetType(ksp, KSPPREONLY));
>         checkError(KSPGetPC(ksp, &pc));
>         checkError(MatSetOption(A, MAT_SPD, PETSC_TRUE));
>         checkError(PCSetType(pc, PCCHOLESKY));
>         checkError(PCFactorSetMatSolverType(pc, MATSOLVERMUMPS));
>         checkError(PCFactorSetUpMatSolverType(pc));
>         checkError(PetscOptionsSetValue(NULL, "-mat_mumps_icntl_13","1"));
>
> Another evidence I am using MUMPS is that If I skip (1)-(3) above, I got
> the PETSc error saying that MUMPS is required.
>
> On Wed, Sep 1, 2021 at 12:00 PM Satish Balay <balay at mcs.anl.gov> wrote:
>
>> mumps is a fortran package - so best to specify fc. Any specific reason
>> for needing to force '--with-fc=0'?
>>
>> The attached configure.log is not using mumps.
>>
>> Satish
>>
>> On Wed, 1 Sep 2021, Sam Guo wrote:
>>
>> > fc should not be required since I link PETSc with pre-compiled MUMPS. In
>> > fact, --with-mumps-include --with-mumps-lib --with-mumps-serial should
>> not
>> > be required since my own CMake defines -DPETSC_HAVE_MUMPS and links my
>> > pre-compiled MUMPS.
>> >
>> > I am able to make it work using PETSc 3.11.3. Attached please find the
>> > cPETSc 3.11.3 onfigure.log PETSc.
>> >
>> > On Tue, Aug 31, 2021 at 4:47 PM Satish Balay <balay at mcs.anl.gov> wrote:
>> >
>> > >
>> > >
>> *******************************************************************************
>> > >          UNABLE to CONFIGURE with GIVEN OPTIONS    (see configure.log
>> for
>> > > details):
>> > >
>> > >
>> -------------------------------------------------------------------------------
>> > > Package mumps requested requires Fortran but compiler turned off.
>> > >
>> > >
>> *******************************************************************************
>> > >
>> > > i.e remove '--with-fc=0' and rerun configure.
>> > >
>> > > Satish
>> > >
>> > > On Tue, 31 Aug 2021, Sam Guo wrote:
>> > >
>> > > > Attached please find the latest configure.log.
>> > > >
>> > > > grep MUMPS_VERSION
>> > > >
>> > >
>> /u/cd4hhv/dev4/mumps/5.2.1-vanilla-parmetis3.2.0-openmp-cda-001/linux-x86_64-2.3.4/include/*.h
>> > > >
>> > >
>> /u/cd4hhv/dev4/mumps/5.2.1-vanilla-parmetis3.2.0-openmp-cda-001/linux-x86_64-2.3.4/include/cmumps_c.h:#ifndef
>> > > > MUMPS_VERSION
>> > > >
>> > >
>> /u/cd4hhv/dev4/mumps/5.2.1-vanilla-parmetis3.2.0-openmp-cda-001/linux-x86_64-2.3.4/include/cmumps_c.h:#define
>> > > > MUMPS_VERSION "5.2.1"
>> > > >
>> > >
>> /u/cd4hhv/dev4/mumps/5.2.1-vanilla-parmetis3.2.0-openmp-cda-001/linux-x86_64-2.3.4/include/cmumps_c.h:#ifndef
>> > > > MUMPS_VERSION_MAX_LEN
>> > > >
>> > >
>> /u/cd4hhv/dev4/mumps/5.2.1-vanilla-parmetis3.2.0-openmp-cda-001/linux-x86_64-2.3.4/include/cmumps_c.h:#define
>> > > > MUMPS_VERSION_MAX_LEN 30
>> > > >
>> > >
>> /u/cd4hhv/dev4/mumps/5.2.1-vanilla-parmetis3.2.0-openmp-cda-001/linux-x86_64-2.3.4/include/cmumps_c.h:
>> > > >    char version_number[MUMPS_VERSION_MAX_LEN + 1 + 1];
>> > > >
>> > >
>> /u/cd4hhv/dev4/mumps/5.2.1-vanilla-parmetis3.2.0-openmp-cda-001/linux-x86_64-2.3.4/include/dmumps_c.h:#ifndef
>> > > > MUMPS_VERSION
>> > > >
>> > >
>> /u/cd4hhv/dev4/mumps/5.2.1-vanilla-parmetis3.2.0-openmp-cda-001/linux-x86_64-2.3.4/include/dmumps_c.h:#define
>> > > > MUMPS_VERSION "5.2.1"
>> > > >
>> > >
>> /u/cd4hhv/dev4/mumps/5.2.1-vanilla-parmetis3.2.0-openmp-cda-001/linux-x86_64-2.3.4/include/dmumps_c.h:#ifndef
>> > > > MUMPS_VERSION_MAX_LEN
>> > > >
>> > >
>> /u/cd4hhv/dev4/mumps/5.2.1-vanilla-parmetis3.2.0-openmp-cda-001/linux-x86_64-2.3.4/include/dmumps_c.h:#define
>> > > > MUMPS_VERSION_MAX_LEN 30
>> > > >
>> > >
>> /u/cd4hhv/dev4/mumps/5.2.1-vanilla-parmetis3.2.0-openmp-cda-001/linux-x86_64-2.3.4/include/dmumps_c.h:
>> > > >    char version_number[MUMPS_VERSION_MAX_LEN + 1 + 1];
>> > > >
>> > >
>> /u/cd4hhv/dev4/mumps/5.2.1-vanilla-parmetis3.2.0-openmp-cda-001/linux-x86_64-2.3.4/include/smumps_c.h:#ifndef
>> > > > MUMPS_VERSION
>> > > >
>> > >
>> /u/cd4hhv/dev4/mumps/5.2.1-vanilla-parmetis3.2.0-openmp-cda-001/linux-x86_64-2.3.4/include/smumps_c.h:#define
>> > > > MUMPS_VERSION "5.2.1"
>> > > >
>> > >
>> /u/cd4hhv/dev4/mumps/5.2.1-vanilla-parmetis3.2.0-openmp-cda-001/linux-x86_64-2.3.4/include/smumps_c.h:#ifndef
>> > > > MUMPS_VERSION_MAX_LEN
>> > > >
>> > >
>> /u/cd4hhv/dev4/mumps/5.2.1-vanilla-parmetis3.2.0-openmp-cda-001/linux-x86_64-2.3.4/include/smumps_c.h:#define
>> > > > MUMPS_VERSION_MAX_LEN 30
>> > > >
>> > >
>> /u/cd4hhv/dev4/mumps/5.2.1-vanilla-parmetis3.2.0-openmp-cda-001/linux-x86_64-2.3.4/include/smumps_c.h:
>> > > >    char version_number[MUMPS_VERSION_MAX_LEN + 1 + 1];
>> > > >
>> > >
>> /u/cd4hhv/dev4/mumps/5.2.1-vanilla-parmetis3.2.0-openmp-cda-001/linux-x86_64-2.3.4/include/zmumps_c.h:#ifndef
>> > > > MUMPS_VERSION
>> > > >
>> > >
>> /u/cd4hhv/dev4/mumps/5.2.1-vanilla-parmetis3.2.0-openmp-cda-001/linux-x86_64-2.3.4/include/zmumps_c.h:#define
>> > > > MUMPS_VERSION "5.2.1"
>> > > >
>> > >
>> /u/cd4hhv/dev4/mumps/5.2.1-vanilla-parmetis3.2.0-openmp-cda-001/linux-x86_64-2.3.4/include/zmumps_c.h:#ifndef
>> > > > MUMPS_VERSION_MAX_LEN
>> > > >
>> > >
>> /u/cd4hhv/dev4/mumps/5.2.1-vanilla-parmetis3.2.0-openmp-cda-001/linux-x86_64-2.3.4/include/zmumps_c.h:#define
>> > > > MUMPS_VERSION_MAX_LEN 30
>> > > >
>> > >
>> /u/cd4hhv/dev4/mumps/5.2.1-vanilla-parmetis3.2.0-openmp-cda-001/linux-x86_64-2.3.4/include/zmumps_c.h:
>> > > >    char version_number[MUMPS_VERSION_MAX_LEN + 1 + 1];
>> > > >
>> > > > On Mon, Aug 30, 2021 at 9:47 PM Satish Balay <balay at mcs.anl.gov>
>> wrote:
>> > > >
>> > > > > Also - what do you have for:
>> > > > >
>> > > > > grep MUMPS_VERSION
>> > > > >
>> > >
>> /u/cd4hhv/dev4/mumps/5.2.1-vanilla-parmetis3.2.0-openmp-cda-001/linux-x86_64-2.3.4/include/*.h
>> > > > >
>> > > > > Satish
>> > > > >
>> > > > > On Mon, 30 Aug 2021, Satish Balay via petsc-users wrote:
>> > > > >
>> > > > > > please resend the logs
>> > > > > >
>> > > > > > Satish
>> > > > > >
>> > > > > > On Mon, 30 Aug 2021, Sam Guo wrote:
>> > > > > >
>> > > > > > > Same compiling error with --with-mumps-serial=1.
>> > > > > > >
>> > > > > > > On Mon, Aug 30, 2021 at 8:22 PM Satish Balay <
>> balay at mcs.anl.gov>
>> > > > > wrote:
>> > > > > > >
>> > > > > > > > Use the additional option: -with-mumps-serial
>> > > > > > > >
>> > > > > > > > Satish
>> > > > > > > >
>> > > > > > > > On Mon, 30 Aug 2021, Sam Guo wrote:
>> > > > > > > >
>> > > > > > > > > Attached please find the configure.log. I use my own
>> CMake. I
>> > > have
>> > > > > > > > > defined -DPETSC_HAVE_MUMPS. Thanks.
>> > > > > > > > >
>> > > > > > > > > On Mon, Aug 30, 2021 at 4:56 PM Sam Guo <
>> sam.guo at cd-adapco.com
>> > > >
>> > > > > wrote:
>> > > > > > > > >
>> > > > > > > > > > I use pre-installed
>> > > > > > > > > >
>> > > > > > > > > > On Mon, Aug 30, 2021 at 4:53 PM Satish Balay <
>> > > balay at mcs.anl.gov>
>> > > > > > > > wrote:
>> > > > > > > > > >
>> > > > > > > > > >>
>> > > > > > > > > >> Are you using --download-mumps or pre-installed mumps?
>> If
>> > > using
>> > > > > > > > > >> pre-installed - try --download-mumps.
>> > > > > > > > > >>
>> > > > > > > > > >> If you still have issues - send us configure.log and
>> > > make.log
>> > > > > from the
>> > > > > > > > > >> failed build.
>> > > > > > > > > >>
>> > > > > > > > > >> Satish
>> > > > > > > > > >>
>> > > > > > > > > >> On Mon, 30 Aug 2021, Sam Guo wrote:
>> > > > > > > > > >>
>> > > > > > > > > >> > Dear PETSc dev team,
>> > > > > > > > > >> >    I am compiling petsc 3.15.3 and got following
>> compiling
>> > > > > error
>> > > > > > > > > >> > petsc/src/mat/impls/aij/mpi/mumps/mumps.c:52:31:
>> error:
>> > > > > missing
>> > > > > > > > binary
>> > > > > > > > > >> > operator before token "("
>> > > > > > > > > >> >    52 | #if PETSC_PKG_MUMPS_VERSION_GE(5,3,0)
>> > > > > > > > > >> >    Any idea what I did wrong?
>> > > > > > > > > >> >
>> > > > > > > > > >> > Thanks,
>> > > > > > > > > >> > Sam
>> > > > > > > > > >> >
>> > > > > > > > > >>
>> > > > > > > > > >>
>> > > > > > > > >
>> > > > > > > >
>> > > > > > > >
>> > > > > > >
>> > > > > >
>> > > > >
>> > > > >
>> > > >
>> > >
>> > >
>> >
>>
>>
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