[petsc-users] makefile for building application with petsc

Swarnava Ghosh swarnava89 at gmail.com
Mon Feb 15 19:47:29 CST 2021


Dear Petsc developers and users,

I am having some issue with building my code with the following makefile. I
was earlier able to build this with the same makefile on a different
machine. Would you please help me out on this issue?

Contents of makefile:
==============================================
all:sparc

CPPFLAGS = -I ./inc -I ${MKLROOT}/include -L ${MKLROOT}/lib/
-llapack-addons -lmkl_intel_lp64 -lmkl_sequential -lmkl_core -lpthread

SOURCECPP = ./src/main.cc ./src/initObjs.cc ./src/readfiles.cc
./src/energy.cc ./src/ExchangeCorrelation.cc ./src/occupation.cc
./src/poisson.cc ./src/chebyshev.cc ./src/scf.cc ./src/mixing.cc
./src/forces.cc ./src/relaxatoms.cc ./src/multipole.cc
./src/electrostatics.cc ./src/tools.cc

SOURCEH = ./inc/sddft.h ./inc/isddft.h

OBJSC = ./src/main.o ./src/initObjs.o ./src/readfiles.o ./src/energy.o
./src/ExchangeCorrelation.o ./src/occupation.o ./src/poisson.o
./src/chebyshev.o ./src/scf.o ./src/mixing.o ./src/forces.o
./src/relaxatoms.o ./src/multipole.o ./src/electrostatics.o ./src/tools.o

LIBBASE = ./lib/sparc

CLEANFILES = ./lib/sparc

include ${PETSC_DIR}/lib/petsc/conf/variables
include ${PETSC_DIR}/lib/petsc/conf/rules

sparc: ${OBJSC} chkopts
${CLINKER} -Wall -o ${LIBBASE} ${OBJSC} ${PETSC_LIB}
${RM} $(SOURCECPP:%.cc=%.o)

===========================================
Error:
/home/swarnava/petsc/linux-gnu-intel/bin/mpicxx -o src/main.o -c -g
-I/home/swarnava/petsc/include
-I/home/swarnava/petsc/linux-gnu-intel/include    `pwd`/src/main.cc
/home/swarnava/Research/Codes/SPARC/src/main.cc(24): catastrophic error:
cannot open source file "sddft.h"
  #include "sddft.h"
                    ^
====================================================

It's not able to see the header file though I have -I ./inc in  CPPFLAGS.
The directory containing makefile has the directory "inc" with the headers
and "src" with the .cc files.

Thank you,
Swarnava
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