[petsc-users] osx error

Mark Adams mfadams at lbl.gov
Fri Sep 18 11:13:20 CDT 2020


On Fri, Sep 18, 2020 at 11:08 AM Barry Smith <bsmith at petsc.dev> wrote:

>
>    try
>
>    /usr/sbin/traceroute  `hostname`
>


12:02 adams/plex-noprealloc-fix=
~/Codes/petsc/src/ts/utils/dmplexlandau/tutorials$    /usr/sbin/traceroute
 `hostname`
traceroute to marksmac-302.local (127.0.0.1), 64 hops max, 52 byte packets
 1  localhost (127.0.0.1)  0.322 ms  0.057 ms  0.032 ms
12:12 adams/plex-noprealloc-fix=
~/Codes/petsc/src/ts/utils/dmplexlandau/tutorials$


>
>
> On Sep 18, 2020, at 10:07 AM, Mark Adams <mfadams at lbl.gov> wrote:
>
> Let me know if you want anything else.
> Thanks,
> Mark
>
> On Fri, Sep 18, 2020 at 11:05 AM Mark Adams <mfadams at lbl.gov> wrote:
>
>>
>>
>> On Fri, Sep 18, 2020 at 11:04 AM Satish Balay <balay at mcs.anl.gov> wrote:
>>
>>> On Fri, 18 Sep 2020, Satish Balay via petsc-users wrote:
>>>
>>> > > >> 07:41 master *= ~/Codes/petsc$ ping -c 2 MarksMac-302.local
>>> > > >> PING marksmac-302.local (127.0.0.1): 56 data bytes
>>> >
>>> > So it is resolving MarksMac-302.local as 127.0.0.1 - but ping is not
>>> responding?
>>> >
>>> > I know some machines don't respond to external ping [and firewalls can
>>> block it] but don't really know if they always respond to internal ping or
>>> not.
>>> >
>>> > If some machines don't respond to internal ping  - then we can't use
>>> ping test in configure [it will create false negatives - as in this case]
>>>
>>> BTW: To confirm, please try:
>>>
>>> ping 127.0.0.1
>>>
>>
>>
>> 11:02 master *= ~/Codes/petsc$ sudo vi /etc/hosts
>> 11:02 master *= ~/Codes/petsc$ ping 127.0.0.1
>> PING 127.0.0.1 (127.0.0.1): 56 data bytes
>> Request timeout for icmp_seq 0
>> Request timeout for icmp_seq 1
>> Request timeout for icmp_seq 2
>> Request timeout for icmp_seq 3
>> Request timeout for icmp_seq 4
>> Request timeout for icmp_seq 5
>> Request timeout for icmp_seq 6
>> Request timeout for icmp_seq 7
>> Request timeout for icmp_seq 8
>> Request timeout for icmp_seq 9
>> Request timeout for icmp_seq 10
>> Request timeout for icmp_seq 11
>> Request timeout for icmp_seq 12
>> Request timeout for icmp_seq 13
>> Request timeout for icmp_seq 14
>> Request timeout for icmp_seq 15
>> Request timeout for icmp_seq 16
>> Request timeout for icmp_seq 17
>> Request timeout for icmp_seq 18
>> Request timeout for icmp_seq 19
>> Request timeout for icmp_seq 20
>> Request timeout for icmp_seq 21
>>
>> still going ......
>>
>>
>>>
>>> Satish
>>>
>>> >
>>> >
>>> > Mark, can you remove the line that you added to /etc/hosts - i.e:
>>> >
>>> > 127.0.0.1 MarksMac-302.local
>>> >
>>> > And now rerun MPI tests. Do they work or fail?
>>> >
>>> > [this is to check if this test is a false positive on your machine]
>>> >
>>> > Satish
>>> >
>>> >
>>> > On Fri, 18 Sep 2020, Mark Adams wrote:
>>> >
>>> > > On Fri, Sep 18, 2020 at 7:51 AM Matthew Knepley <knepley at gmail.com>
>>> wrote:
>>> > >
>>> > > > On Fri, Sep 18, 2020 at 7:46 AM Mark Adams <mfadams at lbl.gov>
>>> wrote:
>>> > > >
>>> > > >> Oh you did not change my hostname:
>>> > > >>
>>> > > >> 07:37 master *= ~/Codes/petsc$ hostname
>>> > > >> MarksMac-302.local
>>> > > >> 07:41 master *= ~/Codes/petsc$ ping -c 2 MarksMac-302.local
>>> > > >> PING marksmac-302.local (127.0.0.1): 56 data bytes
>>> > > >> Request timeout for icmp_seq 0
>>> > > >>
>>> > > >> --- marksmac-302.local ping statistics ---
>>> > > >> 2 packets transmitted, 0 packets received, 100.0% packet loss
>>> > > >> 07:42 2 master *= ~/Codes/petsc$
>>> > > >>
>>> > > >
>>> > > > This does not make sense to me. You have
>>> > > >
>>> > > >   127.0.0.1 MarksMac-302.local
>>> > > >
>>> > > > in /etc/hosts,
>>> > > >
>>> > >
>>> > > 09:07  ~/.ssh$ cat /etc/hosts
>>> > > ##
>>> > > # Host Database
>>> > > #
>>> > > # localhost is used to configure the loopback interface
>>> > > # when the system is booting.  Do not change this entry.
>>> > > ##
>>> > > 127.0.0.1 localhost
>>> > > 255.255.255.255 broadcasthost
>>> > > 127.0.0.1    MarksMac-5.local
>>> > > 127.0.0.1 243.124.240.10.in-addr.arpa.private.cam.ac.uk
>>> > > 127.0.0.1 MarksMac-302.local
>>> > > 09:07  ~/.ssh$
>>> > >
>>> > >
>>> > >
>>> > >
>>> > >
>>> > > > but you cannot resolve that name?
>>> > > >
>>> > > >   Matt
>>> > > >
>>> > > >
>>> > > >> BTW, I used to get messages about some network issue and
>>> 'changing host
>>> > > >> name to MarksMac-[x+1].local'. That is, the original hostname
>>> > > >> was MarksMac.local, then I got a message about changing
>>> > > >> to MarksMac-1.local, etc. I have not seen these messages for
>>> months but
>>> > > >> apparently this process has continued unabated.
>>> > > >>
>>> > > >>
>>> > > >>
>>> > > >>
>>> > > >>
>>> > > >>
>>> > > >>
>>> > > >>
>>> > > >>
>>> > > >> On Thu, Sep 17, 2020 at 11:10 PM Satish Balay via petsc-users <
>>> > > >> petsc-users at mcs.anl.gov> wrote:
>>> > > >>
>>> > > >>> On Thu, 17 Sep 2020, Matthew Knepley wrote:
>>> > > >>>
>>> > > >>> > On Thu, Sep 17, 2020 at 8:33 PM Barry Smith <bsmith at petsc.dev>
>>> wrote:
>>> > > >>> >
>>> > > >>> > > > On Sep 17, 2020, at 4:59 PM, Satish Balay via petsc-users <
>>> > > >>> > > petsc-users at mcs.anl.gov> wrote:
>>> > > >>> > > >
>>> > > >>> > > > Here is a fix:
>>> > > >>> > > >
>>> > > >>> > > > echo 127.0.0.1 `hostname` | sudo tee -a /etc/hosts
>>> > > >>> > >
>>> > > >>> > >  Satish,
>>> > > >>> > >
>>> > > >>> > >    I don't think you want to be doing this on a Mac (on
>>> anything?)
>>> > > >>> On a
>>> > > >>> > > Mac based on the network configuration etc as it boots up
>>> and as
>>> > > >>> networks
>>> > > >>> > > are accessible or not (wi-fi) it determines what hostname
>>> should be,
>>> > > >>> one
>>> > > >>> > > should never being hardwiring it to some value.
>>> > > >>> > >
>>> > > >>> >
>>> > > >>> > Satish is just naming the loopback interface. I did this on
>>> all my
>>> > > >>> former
>>> > > >>> > Macs.
>>> > > >>>
>>> > > >>>
>>> > > >>> Yes - this doesn't change the hostname. Its just adding an entry
>>> for
>>> > > >>> gethostbyname - for current hostname.
>>> > > >>>
>>> > > >>> >>>
>>> > > >>> 127.0.0.1 MarksMac-302.local
>>> > > >>> <<<
>>> > > >>>
>>> > > >>> Sure - its best to not do this when one has a proper IP name
>>> [like
>>> > > >>> foo.mcs.anl.gov] - but its useful when one has a hostname like
>>> > > >>> "MarksMac-302.local" -that is not DNS resolvable
>>> > > >>>
>>> > > >>> Even if the machine is moved to a different network with a
>>> different
>>> > > >>> name - the current entry won't cause problems [but will need
>>> another entry
>>> > > >>> for the new host name - if this new name is also not DNS
>>> resolvable]
>>> > > >>>
>>> > > >>> Its likely this file is a generated file on  macos  - so might
>>> get reset
>>> > > >>> on reboot - or some network change? [if this is the case - the
>>> change won't
>>> > > >>> be permanent]
>>> > > >>>
>>> > > >>>
>>> > > >>> Satish
>>> > > >>>
>>> > > >>
>>> > > >
>>> > > > --
>>> > > > What most experimenters take for granted before they begin their
>>> > > > experiments is infinitely more interesting than any results to
>>> which their
>>> > > > experiments lead.
>>> > > > -- Norbert Wiener
>>> > > >
>>> > > > https://www.cse.buffalo.edu/~knepley/
>>> > > > <http://www.cse.buffalo.edu/~knepley/>
>>> > > >
>>> > >
>>> >
>>>
>>>
>
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