[petsc-users] configuring on OSX

Brian Van Straalen bvstraalen at lbl.gov
Tue Sep 3 23:24:44 CDT 2019


I can attach the config log.  mpi breaks for yet other reasons so I was
trying to simplify things sufficiently.

if I put mpi back in and take the compiler choices out, I still end up with
failure on CPP.   It seems determined to look for "/lib/cpp" which is only
correct for linux.




On Tue, Sep 3, 2019 at 9:11 PM Balay, Satish <balay at mcs.anl.gov> wrote:

> On Wed, 4 Sep 2019, Balay, Satish via petsc-users wrote:
>
> > On Tue, 3 Sep 2019, Brian Van Straalen via petsc-users wrote:
> >
> > > pulling from git PETSC and on master branch.
> > >
> > > ./configure CPP=/usr/bin/cpp
> > >
> ===============================================================================
> > >              Configuring PETSc to compile on your system
> > >
> > >
> ===============================================================================
> > > TESTING: checkCPreprocessor from
> > > config.setCompilers(config/BuildSystem/config/setCompilers.py:592)
> > >
> > >
> *******************************************************************************
> > >          UNABLE to CONFIGURE with GIVEN OPTIONS    (see configure.log
> for
> > > details):
> > >
> -------------------------------------------------------------------------------
> > > Cannot find a C preprocessor
> > >
> *******************************************************************************
> >
> > Its best to send configure.log
> >
> > >
> > >
> > >
> > > Brian
> > >
> > > my configure script
> > >
> > > configure_options = [
> > > #   '--with-mpi-dir=/usr/local/opt/open-mpi',
>
> Hm - this is commented out anyway. So there is no mpi specified for this
> build (its a mandatory dependency)?
>
> > >    '--with-cc=/usr/bin/clang',
> > >    '--with-cpp=/usr/bin/cpp',
> > >    '--with-cxx=/usr/bin/clang++',
> >
> > The above 3 options are redundant - when --with-mpi-dir is provided.
> PETSc configure will pick up mpicc etc from the specified location.
> >
> > >    '--with-fc=0',
> >
> > Hm - this conflicts with --download-mumps etc that require fortran
> >
> > Satish
> >
> > >     'COPTFLAGS=-g -framework Accelerate',
> > >     'CXXOPTFLAGS=-g -framework Accelerate',
> > >     'FOPTFLAGS=-g',
> > > #  '--with-memalign=64',
> > >   '--download-hypre=1',
> > >   '--download-metis=1',
> > >   '--download-parmetis=1',
> > >   '--download-c2html=1',
> > >   '--download-ctetgen',
> > > #  '--download-viennacl',
> > > #  '--download-ml=1',
> > >   '--download-p4est=1',
> > >   '--download-superlu_dist',
> > >   '--download-superlu',
> > >   '--with-cxx-dialect=C++11',
> > >   '--download-mumps=1',
> > >   '--download-scalapack=1',
> > > #  '--download-exodus=1',
> > > #  '--download-ctetgen=1',
> > >   '--download-triangle=1',
> > > #  '--download-pragmatic=1',
> > > #  '--download-eigen=1',
> > >   '--download-zlib',
> > >   '--with-x=1',
> > >   '--with-sowing=0',
> > >   '--with-debugging=1',
> > >   '--with-precision=double',
> > >   'PETSC_ARCH=arch-macosx-gnu-g',
> > >   '--download-chaco'
> > >   ]
> > >
> > > if __name__ == '__main__':
> > >   import sys,os
> > >   sys.path.insert(0,os.path.abspath('config'))
> > >   import configure
> > >   configure.petsc_configure(configure_options)
> > >
> > >
> > >
> >
>
>

-- 
Brian Van Straalen         Lawrence Berkeley Lab
BVStraalen at lbl.gov        Computational Research
(510) 486-4976            Division (crd.lbl.gov)
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