[petsc-users] Error during install check - intel compiler

[Smith, Barry F.]

   Seems a problem with the MPI install. You could try compiling and running a same MPI (only) code to see if MPI_Init() then MPI_Finalize() succeed or not.

    Barry


> On Mar 11, 2019, at 4:47 PM, Edoardo alinovi <edoardo.alinovi at gmail.com> wrote:
> 
> Thanks Barry for the help as usual.
> 
> Attached the errors. Maybe intel is not installed correctly? (I have used the gui provided by intel so I do not know if this is the case...)
> ------
> 
> Edoardo Alinovi, Ph.D.
> 
> DICCA, Scuola Politecnica,
> Universita' degli Studi di Genova,
> 1, via Montallegro,
> 16145 Genova, Italy
> 
> Email: edoardo.alinovi at dicca.unige.it
> Tel: +39 010 353 2540
> 
> 
> 
> 
> 
> Il giorno lun 11 mar 2019 alle ore 22:33 Smith, Barry F. <bsmith at mcs.anl.gov> ha scritto:
> 
>    Not good. Run the test manually, then in the debugger to see exactly where it is crashing.
> 
>     cd src/snes/examples/tutorials
>     make ex19
>     ./ex19 
> 
>     gdb (or the intel debugger) ./ex19 
>     run
> 
>     Send all the output
> 
> 
> > On Mar 11, 2019, at 4:13 PM, Edoardo alinovi via petsc-users <petsc-users at mcs.anl.gov> wrote:
> > 
> > Dear all,
> > 
> > It's a while that I do not write here, hope you are doing all very well!  
> > 
> > I am compiling petsc with intel, everything seems fine druing configuration and make steps but when I perform the install check I get several errors (attached the log file).  Are they dangerous (they are not  very encouraging  segmentation faults) ? What can I do to fix a bit the thing in the case?
> > 
> > Configuration options are:
> > 
> > ./configure PETSC_ARCH=arch-intel-opt --with-debugging=no --with-cxx-dialect=C++11 --download-superlu_dist --download-mumps --download-hypre --download-metis --download-parmetis --download-scalapack  --with-cc=mpiicc --with-cxx=mpiicpc --with-fc=mpiifort --with-debugging=0 COPTFLAGS='-ipo -03 -xHost' CXXOPTFLAGS='-ipo -03 -xHost' FOPTFLAGS='-ipo -03 -xHost' --with-blas-lapack-dir=$HOME/intel/mkl --with-mkl_pardiso-dir=$HOME/intel/mkl --with-mkl_cpardiso-dir=$HOME/intel/mkl
> > 
> > The compiler that I m using comes with intel parallel studio 2019.
> > 
> > As always every hints is hightly appreciated. Thank you very much! 
> > 
> > -----
> > 
> > Edoardo Alinovi, Ph.D.
> > 
> > DICCA, Scuola Politecnica,
> > Universita' degli Studi di Genova,
> > 1, via Montallegro,
> > 16145 Genova, Italy
> > 
> > Email: edoardo.alinovi at dicca.unige.it
> > Tel: +39 010 353 2540
> > 
> > 
> > 
> > 
> > <log.errors>
> 
> <ex19.error>