[petsc-users] Problem to configure

[Fazlul Huq]

It works!

Thanks.
Sincerely,
Huq

On Tue, Nov 20, 2018 at 6:17 PM Balay, Satish <balay at mcs.anl.gov> wrote:

> Try:
>
> rm -rf arch-linux2-c-debug
>
> And rebuild petsc. ie. redo configure and make
>
> Satish
>
> We don't know why this On Tue, 20 Nov 2018, Fazlul Huq via petsc-users
> wrote:
>
> > Thanks.
> > ./configure --download-hypre  --download-mpich works well.
> > But when I run the follwoing:
> > make PETSC_DIR=/home/huq2090/petsc-3.10.2 PETSC_ARCH=arch-linux2-c-debug
> all
> >
> > I got following errors:
> >
> $$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$
> > CLINKER arch-linux2-c-debug/lib/libpetsc.so.3.10.2
> > arch-linux2-c-debug/obj/mat/impls/baij/seq/baij.o: In function
> > `MatCreate_SeqBAIJ':
> > /home/huq2090/petsc-3.10.2/src/mat/impls/baij/seq/baij.c:3049: undefined
> > reference to `MatConvert_AIJ_HYPRE'
> > /usr/bin/ld: arch-linux2-c-debug/obj/mat/impls/baij/seq/baij.o:
> relocation
> > R_X86_64_PC32 against undefined hidden symbol `MatConvert_AIJ_HYPRE' can
> > not be used when making a shared object
> > /usr/bin/ld: final link failed: Bad value
> > collect2: error: ld returned 1 exit status
> > gmakefile:86: recipe for target
> > 'arch-linux2-c-debug/lib/libpetsc.so.3.10.2' failed
> > make[2]: *** [arch-linux2-c-debug/lib/libpetsc.so.3.10.2] Error 1
> > make[2]: Leaving directory '/home/huq2090/petsc-3.10.2'
> > /home/huq2090/petsc-3.10.2/lib/petsc/conf/rules:81: recipe for target
> > 'gnumake' failed
> > make[1]: *** [gnumake] Error 2
> > make[1]: Leaving directory '/home/huq2090/petsc-3.10.2'
> > **************************ERROR*************************************
> >   Error during compile, check arch-linux2-c-debug/lib/petsc/conf/make.log
> >   Send it and arch-linux2-c-debug/lib/petsc/conf/configure.log to
> > petsc-maint at mcs.anl.gov
> > ********************************************************************
> > makefile:30: recipe for target 'all' failed
> > make: *** [all] Error 1
> >
> $$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$
> >
> > Again, the log file is attached herewith.
> >
> > Note: I have moose installed in my laptop but I have commented out from
> > bashrc file
> > #moose
> > #if [ -f /opt/moose/environments/moose_profile ]; then
> >  #   . /opt/moose/environments/moose_profile
> > #fi
> >
> > Thanks.
> > Sincerely,
> > Huq
> >
> > On Tue, Nov 20, 2018 at 4:59 PM Balay, Satish <balay at mcs.anl.gov> wrote:
> >
> > > As the message suggests - you don't have MPI installed - so run:
> > >
> > > ./configure --download-hypre  --download-mpich
> > >
> > > Satish
> > >
> > > On Tue, 20 Nov 2018, Fazlul Huq via petsc-users wrote:
> > >
> > > > Hello PETSc Developers,
> > > >
> > > > I am trying to configure PETSc with ./configure --download-hypre
> > > > but I got the following message on terminal:
> > > >
> > > >
> ========================================================================
> > > >              Configuring PETSc to compile on your system
> > > >
> > > >
> =========================================================================
> > > > TESTING: check from
> > > > config.libraries(config/BuildSystem/config/libraries.py:158)
> > > >
> > > >
> > >
> *******************************************************************************
> > > >          UNABLE to CONFIGURE with GIVEN OPTIONS    (see
> configure.log for
> > > > details):
> > > >
> > >
> -------------------------------------------------------------------------------
> > > > Unable to find mpi in default locations!
> > > > Perhaps you can specify with --with-mpi-dir=<directory>
> > > > If you do not want MPI, then give --with-mpi=0
> > > > You might also consider using --download-mpich instead
> > > >
> > >
> *******************************************************************************
> > > >
> > > > The log file is attached herewith.
> > > >
> > > > Thanks.
> > > > Sincerely,
> > > > Huq
> > > >
> > >
> > >
> >
> >
>
>

-- 

Fazlul Huq
Graduate Research Assistant
Department of Nuclear, Plasma & Radiological Engineering (NPRE)
University of Illinois at Urbana-Champaign (UIUC)
E-mail: huq2090 at gmail.com
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