[petsc-users] VecGetArrayReadF90 with gfortran
Satish Balay
balay at mcs.anl.gov
Fri Mar 23 11:42:27 CDT 2018
Attaching the modified version that works with complex [using complex build of petsc]
BTW: I'm using the following gfortran [but I don't think the version makes any difference] with petsc-3.8 (maint branch):
$ gfortran --version
GNU Fortran (GCC) 8.0.1 20180222 (Red Hat 8.0.1-0.16)
Satish
--------
balay at asterix /home/balay/download-pine
$ make ex2f
mpif90 -c -Wall -ffree-line-length-0 -Wno-unused-dummy-argument -g -I/home/balay/petsc/include -I/home/balay/petsc/arch-cmplx/include -o ex2f.o ex2f.F90
mpif90 -Wall -ffree-line-length-0 -Wno-unused-dummy-argument -g -o ex2f ex2f.o -Wl,-rpath,/home/balay/petsc/arch-cmplx/lib -L/home/balay/petsc/arch-cmplx/lib -Wl,-rpath,/home/balay/soft/mpich-3.3b1/lib -L/home/balay/soft/mpich-3.3b1/lib -Wl,-rpath,/usr/lib/gcc/x86_64-redhat-linux/8 -L/usr/lib/gcc/x86_64-redhat-linux/8 -lpetsc -llapack -lblas -lX11 -lpthread -lm -lmpifort -lgfortran -lm -lgfortran -lm -lquadmath -lmpicxx -lstdc++ -lm -Wl,-rpath,/home/balay/soft/mpich-3.3b1/lib -L/home/balay/soft/mpich-3.3b1/lib -Wl,-rpath,/usr/lib/gcc/x86_64-redhat-linux/8 -L/usr/lib/gcc/x86_64-redhat-linux/8 -ldl -Wl,-rpath,/home/balay/soft/mpich-3.3b1/lib -lmpi -lgcc_s -ldl
/usr/bin/rm -f ex2f.o
balay at asterix /home/balay/download-pine
$ ./ex2f
setting values
assembling vector
copying vector to array
N = 10
m = 10
getting vecX size
getting ownership range
ownership range: 0 10
copy values to global array
vecX_pt:
SIZE = 10
(1.0000000000000000,0.0000000000000000)
(2.0000000000000000,0.0000000000000000)
(3.0000000000000000,0.0000000000000000)
(4.0000000000000000,0.0000000000000000)
(5.0000000000000000,0.0000000000000000)
(6.0000000000000000,0.0000000000000000)
(7.0000000000000000,0.0000000000000000)
(8.0000000000000000,0.0000000000000000)
(9.0000000000000000,0.0000000000000000)
(10.000000000000000,0.0000000000000000)
copy_buffer =
(1.0000000000000000,0.0000000000000000)
(2.0000000000000000,0.0000000000000000)
(3.0000000000000000,0.0000000000000000)
(4.0000000000000000,0.0000000000000000)
(5.0000000000000000,0.0000000000000000)
(6.0000000000000000,0.0000000000000000)
(7.0000000000000000,0.0000000000000000)
(8.0000000000000000,0.0000000000000000)
(9.0000000000000000,0.0000000000000000)
(10.000000000000000,0.0000000000000000)
calling allreduce
buffer =
(1.0000000000000000,0.0000000000000000)
(2.0000000000000000,0.0000000000000000)
(3.0000000000000000,0.0000000000000000)
(4.0000000000000000,0.0000000000000000)
(5.0000000000000000,0.0000000000000000)
(6.0000000000000000,0.0000000000000000)
(7.0000000000000000,0.0000000000000000)
(8.0000000000000000,0.0000000000000000)
(9.0000000000000000,0.0000000000000000)
(10.000000000000000,0.0000000000000000)
balay at asterix /home/balay/download-pine
$
On Fri, 23 Mar 2018, Satish Balay wrote:
> I'm attaching the modified code - that appears to work fine for me. My changes are:
>
> 1. use .F90 suffix - so the compiler does the f90 freeform/preprocessing automatically
> 2. remove slepc references and use petsc only
> 3. compile with a petsc formatted makefile
> 4. replace complex with real*8 - thats compatible with PetscScalar
>
> So perhaps you can modify your version of test code - to be closer to
> this one [or vice versa] to see what is triggering the difference in
> behavior.
>
> Satish
>
> On Fri, 23 Mar 2018, Samuel Lanthaler wrote:
>
> > Hi all,
> >
> > I am having trouble using the function VecGetArrayReadF90 under gfortran. I
> > have created a minimal example and put it in the attachment. Basically, it
> > appears that the input pointer is empty upon return from
> > VecGetArrayReadF90. The code runs fine, when compiled with ifort, so I
> > don't know what's going on.
> >
> > I am attaching the code and makefile that I used, as well as the command
> > line output that I can see. Though the errors are just to do with the fact
> > that the output pointer is empty, so the command line output is not all
> > that helpful...
> >
> > Thanks in advance for your help!
> > Sam
> >
>
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CFLAGS =
FFLAGS =
CPPFLAGS =
FPPFLAGS =
include ${PETSC_DIR}/lib/petsc/conf/variables
include ${PETSC_DIR}/lib/petsc/conf/rules
ex1f: ex1f.o chkopts
-${FLINKER} -o ex1f ex1f.o ${PETSC_KSP_LIB}
${RM} ex1f.o
ex2f: ex2f.o chkopts
-${FLINKER} -o ex2f ex2f.o ${PETSC_KSP_LIB}
${RM} ex2f.o
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