[petsc-users] jmp_buf error while linking petsc

[Bikash Kanungo]

Hi Satish,

Yes, I ran 'make test' and it didn't throw any error. Here's my test.log:

Running test examples to verify correct installation
Using
PETSC_DIR=/home/bikashk/softwares/femdft_softwares/petsc/opt_3.7.5_mvapich2_64bit_complex
and PETSC_ARCH=
C/C++ example src/snes/examples/tutorials/ex19 run successfully with 1 MPI
process
C/C++ example src/snes/examples/tutorials/ex19 run successfully with 2 MPI
processes
Fortran example src/snes/examples/tutorials/ex5f run successfully with 1
MPI process
Completed test examples


Thanks,
Bikash

On Tue, Mar 21, 2017 at 6:51 PM, Satish Balay <balay at mcs.anl.gov> wrote:

> Did you run 'make test' after insatalling PETSc? Were there errors with
> this test?
>
> [you can send us corresponding test.log]
>
> Satish
>
> On Tue, 21 Mar 2017, Bikash Kanungo wrote:
>
> > Hi,
> >
> > I have recently installed petsc-3.7.5. However, while linking petsc with
> my
> > code, I get the following compilation error:
> >
> > /home/bikashk/softwares/femdft_softwares/petsc/opt_3.
> 7.5_mvapich2_64bit_complex/include/petscdraw.h(335):
> > error: identifier "jmp_buf" is undefined
> >   PETSC_EXTERN jmp_buf PetscXIOErrorHandlerJumpBuf;
> >
> >
> > I used the following configure options while compiling petsc:
> > ./configure
> > --prefix=/home/bikashk/softwares/femdft_softwares/
> petsc/opt_3.7.5_mvapich2_64bit_complex
> > --with-debugging=no --with-scalar-type=complex CFLAGS="-O3 -xcore-avx2"
> > CXXFLAGS="-O3 -xcore-avx2" --with-mpi-dir=/opt/mvapich2/intel/ib/
> > -with-blas-lib="-Wl,--start-group
> > /opt/intel/composer_xe_2015.2.164/mkl/lib/intel64/libmkl_intel_lp64.a
> > /opt/intel/composer_xe_2015.2.164/mkl/lib/intel64/libmkl_sequential.a
> > /opt/intel/composer_xe_2015.2.164/mkl/lib/intel64/libmkl_core.a
> > -Wl,--end-group -lpthread -lm" --with-lapack-lib="-Wl,--start-group
> > /opt/intel/composer_xe_2015.2.164/mkl/lib/intel64/libmkl_intel_lp64.a
> > /opt/intel/composer_xe_2015.2.164/mkl/lib/intel64/libmkl_sequential.a
> > /opt/intel/composer_xe_2015.2.164/mkl/lib/intel64/libmkl_core.a
> > -Wl,--end-group -lpthread -lm" --with-cxx-dialect=C++11
> >
> > I would really appreciate any help on how to fix it.
> >
> > Thanks,
> > Bikash
> >
>
>


-- 
Bikash S. Kanungo
PhD Student
Computational Materials Physics Group
Mechanical Engineering
University of Michigan
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://lists.mcs.anl.gov/pipermail/petsc-users/attachments/20170321/c780e087/attachment.html>