[petsc-users] slepc NHEP error

Kannan, Ramakrishnan kannanr at ornl.gov
Wed Jun 14 16:24:48 CDT 2017



-- 
Regards,
Ramki
 

On 6/14/17, 5:21 PM, "Barry Smith" <bsmith at mcs.anl.gov> wrote:

    
       Send the file autofs/nccs-svm1_home1/ramki/libraries/slepc-3.7.3/src/sys/classes/bv/interface/bvblas.c as an attachment.
    
       Barry
    
    > On Jun 14, 2017, at 4:17 PM, Kannan, Ramakrishnan <kannanr at ornl.gov> wrote:
    > 
    > Barry,
    > 
    > Appreciate your kind help. It compiles fine. I am still getting the following error.
    > 
    > [0]PETSC ERROR: #1 BVDotVec_BLAS_Private() line 272 in /autofs/nccs-svm1_home1/ramki/libraries/slepc-3.7.3/src/sys/classes/bv/interface/bvblas.c
    > [0]PETSC ERROR: #2 BVDotVec_Svec() line 150 in /autofs/nccs-svm1_home1/ramki/libraries/slepc-3.7.3/src/sys/classes/bv/impls/svec/svec.c
    > [0]PETSC ERROR: #3 BVDotVec() line 191 in /autofs/nccs-svm1_home1/ramki/libraries/slepc-3.7.3/src/sys/classes/bv/interface/bvglobal.c
    > [0]PETSC ERROR: #4 BVOrthogonalizeCGS1() line 81 in /autofs/nccs-svm1_home1/ramki/libraries/slepc-3.7.3/src/sys/classes/bv/interface/bvorthog.c
    > [0]PETSC ERROR: #5 BVOrthogonalizeCGS() line 214 in /autofs/nccs-svm1_home1/ramki/libraries/slepc-3.7.3/src/sys/classes/bv/interface/bvorthog.c
    > [0]PETSC ERROR: #6 BVOrthogonalizeColumn() line 371 in /autofs/nccs-svm1_home1/ramki/libraries/slepc-3.7.3/src/sys/classes/bv/interface/bvorthog.c
    > [0]PETSC ERROR: [8]PETSC ERROR: #1 BVDotVec_BLAS_Private() line 272 in /autofs/nccs-svm1_home1/ramki/libraries/slepc-3.7.3/src/sys/classes/bv/interface/bvblas.c
    > [8]PETSC ERROR: #2 BVDotVec_Svec() line 150 in /autofs/nccs-svm1_home1/ramki/libraries/slepc-3.7.3/src/sys/classes/bv/impls/svec/svec.c
    > [8]PETSC ERROR: #3 BVDotVec() line 191 in /autofs/nccs-svm1_home1/ramki/libraries/slepc-3.7.3/src/sys/classes/bv/interface/bvglobal.c
    > [8]PETSC ERROR: #4 BVOrthogonalizeCGS1() line 81 in /autofs/nccs-svm1_home1/ramki/libraries/slepc-3.7.3/src/sys/classes/bv/interface/bvorthog.c
    > [8]PETSC ERROR: #5 BVOrthogonalizeCGS() line 214 in /autofs/nccs-svm1_home1/ramki/libraries/slepc-3.7.3/src/sys/classes/bv/interface/bvorthog.c
    > [8]PETSC ERROR: #6 BVOrthogonalizeColumn() line 371 in /autofs/nccs-svm1_home1/ramki/libraries/slepc-3.7.3/src/sys/classes/bv/interface/bvorthog.c
    > [8]PETSC ERROR: #7 EPSBasicArnoldi() line 59 in /autofs/nccs-svm1_home1/ramki/libraries/slepc-3.7.3/src/eps/impls/krylov/epskrylov.c
    > [8]PETSC ERROR: #8 EPSSolve_KrylovSchur_Default() line 203 in /autofs/nccs-svm1_home1/ramki/libraries/slepc-3.7.3/src/eps/impls/krylov/krylovschur/krylovschur.c
    > [8]PETSC ERROR: #9 EPSSolve() line 101 in /autofs/nccs-svm1_home1/ramki/libraries/slepc-3.7.3/src/eps/interface/epssolve.c
    > [8]PETSC ERROR: #10 count() line 266 in /lustre/atlas/proj-shared/csc040/gryffin/gryffndor/miniapps/cmake/../algorithms/tricount.hpp
    > [2]PETSC ERROR: #1 BVDotVec_BLAS_Private() line 272 in /autofs/nccs-svm1_home1/ramki/libraries/slepc-3.7.3/src/sys/classes/bv/interface/bvblas.c
    > [2]PETSC ERROR: #2 BVDotVec_Svec() line 150 in /autofs/nccs-svm1_home1/ramki/libraries/slepc-3.7.3/src/sys/classes/bv/impls/svec/svec.c
    > [2]PETSC ERROR: #3 BVDotVec() line 191 in /autofs/nccs-svm1_home1/ramki/libraries/slepc-3.7.3/src/sys/classes/bv/interface/bvglobal.c
    > [2]PETSC ERROR: #4 BVOrthogonalizeCGS1() line 81 in /autofs/nccs-svm1_home1/ramki/libraries/slepc-3.7.3/src/sys/classes/bv/interface/bvorthog.c
    > [2]PETSC ERROR: #5 BVOrthogonalizeCGS() line 214 in /autofs/nccs-svm1_home1/ramki/libraries/slepc-3.7.3/src/sys/classes/bv/interface/bvorthog.c
    > [2]PETSC ERROR: #6 BVOrthogonalizeColumn() line 371 in /autofs/nccs-svm1_home1/ramki/libraries/slepc-3.7.3/src/sys/classes/bv/interface/bvorthog.c
    > [2]PETSC ERROR: #7 EPSBasicArnoldi() line 59 in /autofs/nccs-svm1_home1/ramki/libraries/slepc-3.7.3/src/eps/impls/krylov/epskrylov.c
    > [2]PETSC ERROR: #8 EPSSolve_KrylovSchur_Default() line 203 in /autofs/nccs-svm1_home1/ramki/libraries/slepc-3.7.3/src/eps/impls/krylov/krylovschur/krylovschur.c
    > [2]PETSC ERROR: #9 EPSSolve() line 101 in /autofs/nccs-svm1_home1/ramki/libraries/slepc-3.7.3/src/eps/interface/epssolve.c
    > [2]PETSC ERROR: #10 count() line 266 in /lustre/atlas/proj-shared/csc040/gryffin/gryffndor/miniapps/cmake/../algorithms/tricount.hpp
    > #7 EPSBasicArnoldi() line 59 in /autofs/nccs-svm1_home1/ramki/libraries/slepc-3.7.3/src/eps/impls/krylov/epskrylov.c
    > [0]PETSC ERROR: #8 EPSSolve_KrylovSchur_Default() line 203 in /autofs/nccs-svm1_home1/ramki/libraries/slepc-3.7.3/src/eps/impls/krylov/krylovschur/krylovschur.c
    > [0]PETSC ERROR: #9 EPSSolve() line 101 in /autofs/nccs-svm1_home1/ramki/libraries/slepc-3.7.3/src/eps/interface/epssolve.c
    > [0]PETSC ERROR: #10 count() line 266 in /lustre/atlas/proj-shared/csc040/gryffin/gryffndor/miniapps/cmake/../algorithms/tricount.hpp
    > [7]PETSC ERROR: #1 BVDotVec_BLAS_Private() line 272 in /autofs/nccs-svm1_home1/ramki/libraries/slepc-3.7.3/src/sys/classes/bv/interface/bvblas.c
    > [7]PETSC ERROR: #2 BVDotVec_Svec() line 150 in /autofs/nccs-svm1_home1/ramki/libraries/slepc-3.7.3/src/sys/classes/bv/impls/svec/svec.c
    > [7]PETSC ERROR: #3 BVDotVec() line 191 in /autofs/nccs-svm1_home1/ramki/libraries/slepc-3.7.3/src/sys/classes/bv/interface/bvglobal.c
    > [7]PETSC ERROR: #4 BVOrthogonalizeCGS1() line 81 in /autofs/nccs-svm1_home1/ramki/libraries/slepc-3.7.3/src/sys/classes/bv/interface/bvorthog.c
    > [7]PETSC ERROR: #5 BVOrthogonalizeCGS() line 214 in /autofs/nccs-svm1_home1/ramki/libraries/slepc-3.7.3/src/sys/classes/bv/interface/bvorthog.c
    > [7]PETSC ERROR: [15]PETSC ERROR: #1 BVDotVec_BLAS_Private() line 272 in /autofs/nccs-svm1_home1/ramki/libraries/slepc-3.7.3/src/sys/classes/bv/interface/bvblas.c
    > [15]PETSC ERROR: #2 BVDotVec_Svec() line 150 in /autofs/nccs-svm1_home1/ramki/libraries/slepc-3.7.3/src/sys/classes/bv/impls/svec/svec.c
    > [15]PETSC ERROR: #3 BVDotVec() line 191 in /autofs/nccs-svm1_home1/ramki/libraries/slepc-3.7.3/src/sys/classes/bv/interface/bvglobal.c
    > [15]PETSC ERROR: #4 BVOrthogonalizeCGS1() line 81 in /autofs/nccs-svm1_home1/ramki/libraries/slepc-3.7.3/src/sys/classes/bv/interface/bvorthog.c
    > [15]PETSC ERROR: #5 BVOrthogonalizeCGS() line 214 in /autofs/nccs-svm1_home1/ramki/libraries/slepc-3.7.3/src/sys/classes/bv/interface/bvorthog.c
    > [15]PETSC ERROR: #6 BVOrthogonalizeColumn() line 371 in /autofs/nccs-svm1_home1/ramki/libraries/slepc-3.7.3/src/sys/classes/bv/interface/bvorthog.c
    > [15]PETSC ERROR: #7 EPSBasicArnoldi() line 59 in /autofs/nccs-svm1_home1/ramki/libraries/slepc-3.7.3/src/eps/impls/krylov/epskrylov.c
    > [15]PETSC ERROR: #8 EPSSolve_KrylovSchur_Default() line 203 in /autofs/nccs-svm1_home1/ramki/libraries/slepc-3.7.3/src/eps/impls/krylov/krylovschur/krylovschur.c
    > [15]PETSC ERROR: #9 EPSSolve() line 101 in /autofs/nccs-svm1_home1/ramki/libraries/slepc-3.7.3/src/eps/interface/epssolve.c
    > [15]PETSC ERROR: #10 count() line 266 in /lustre/atlas/proj-shared/csc040/gryffin/gryffndor/miniapps/cmake/../algorithms/tricount.hpp
    > #6 BVOrthogonalizeColumn() line 371 in /autofs/nccs-svm1_home1/ramki/libraries/slepc-3.7.3/src/sys/classes/bv/interface/bvorthog.c
    > [7]PETSC ERROR: #7 EPSBasicArnoldi() line 59 in /autofs/nccs-svm1_home1/ramki/libraries/slepc-3.7.3/src/eps/impls/krylov/epskrylov.c
    > [7]PETSC ERROR: #8 EPSSolve_KrylovSchur_Default() line 203 in /autofs/nccs-svm1_home1/ramki/libraries/slepc-3.7.3/src/eps/impls/krylov/krylovschur/krylovschur.c
    > [7]PETSC ERROR: #9 EPSSolve() line 101 in /autofs/nccs-svm1_home1/ramki/libraries/slepc-3.7.3/src/eps/interface/epssolve.c
    > [7]PETSC ERROR: #10 count() line 266 in /lustre/atlas/proj-shared/csc040/gryffin/gryffndor/miniapps/cmake/../algorithms/tricount.hpp
    > 
    > -- 
    > Regards,
    > Ramki
    > 
    > 
    > On 6/14/17, 4:48 PM, "Barry Smith" <bsmith at mcs.anl.gov> wrote:
    > 
    > 
    >> On Jun 14, 2017, at 3:45 PM, Kannan, Ramakrishnan <kannanr at ornl.gov> wrote:
    >> 
    >> Barry,
    >> 
    >> All the functions here are standard SLEPC functions and there are no user-defined or custom code here. As you can see, when I uncomment the CHKERRQ macros in my code, I am getting the compilation error. 
    > 
    >       Yes that is because YOUR function that calls the SLEPc functions is void and doesn't return an error code. It is that function I recommend changing to return error codes.
    > 
    >        Barry
    > 
    >> 
    >> -- 
    >> Regards,
    >> Ramki
    >> 
    >> 
    >> On 6/14/17, 4:40 PM, "Barry Smith" <bsmith at mcs.anl.gov> wrote:
    >> 
    >> 
    >>> On Jun 14, 2017, at 3:33 PM, Kannan, Ramakrishnan <kannanr at ornl.gov> wrote:
    >>> 
    >>> Can I use CHKERRV instead of CHKERRQ? Will that help?
    >> 
    >>      You can do that. But I question you having functions in your code that return void instead of an error code. Without error codes you are just hurting your own productivity.
    >> 
    >>      Barry
    >> 
    >>> 
    >>> -- 
    >>> Regards,
    >>> Ramki
    >>> 
    >>> 
    >>> On 6/14/17, 4:25 PM, "Kannan, Ramakrishnan" <kannanr at ornl.gov> wrote:
    >>> 
    >>>  I get the following compilation error when I have CHKERRQ.
    >>> 
    >>>  /opt/cray/petsc/3.7.4.0/real/GNU64/5.1/sandybridge/include/petscerror.h:433:154: error: return-statement with a value, in function returning 'void' [-fpermissive]
    >>>   #define CHKERRQ(n)             do {if (PetscUnlikely(n)) return PetscError(PETSC_COMM_SELF,__LINE__,PETSC_FUNCTION_NAME,__FILE__,n,PETSC_ERROR_REPEAT," ");} while (0)
    >>> 
    >>> 
    >>>  -- 
    >>>  Regards,
    >>>  Ramki
    >>> 
    >>> 
    >>>  On 6/14/17, 4:14 PM, "Barry Smith" <bsmith at mcs.anl.gov> wrote:
    >>> 
    >>> 
    >>>        Why do you have the CHKERRQ(ierr); commented out in your code? 
    >>> 
    >>>         Because of this you are getting mangled confusing error messages. 
    >>> 
    >>>         Put a ierr = in front of all calls and a CHKERRQ(ierr); after each call. 
    >>> 
    >>>         Then resend the new error message which will be much clearer.
    >>> 
    >>> 
    >>> 
    >>>> On Jun 14, 2017, at 2:58 PM, Kannan, Ramakrishnan <kannanr at ornl.gov> wrote:
    >>>> 
    >>>> Hello,
    >>>> 
    >>>> I am running NHEP across 16 MPI processors over 16 nodes in a matrix of global size of 1,000,000x1,000,000 with approximately global 16,000,000 non-zeros. Each node has approximately 1million non-zeros.
    >>>> 
    >>>> The following is my slepc code for EPS.
    >>>> 
    >>>> PetscInt nev;
    >>>> ierr = EPSCreate(PETSC_COMM_WORLD, &eps);  // CHKERRQ(ierr);
    >>>> ierr = EPSSetOperators(eps, A, NULL);  // CHKERRQ(ierr);
    >>>> ierr = EPSSetProblemType(eps, EPS_NHEP);  // CHKERRQ(ierr);
    >>>> EPSSetWhichEigenpairs(eps, EPS_LARGEST_REAL);
    >>>> EPSSetDimensions(eps, 100, PETSC_DEFAULT, PETSC_DEFAULT);
    >>>> PRINTROOT("calling epssolve");
    >>>> ierr = EPSSolve(eps);  // CHKERRQ(ierr);
    >>>> ierr = EPSGetType(eps, &type);  // CHKERRQ(ierr);
    >>>> ierr = PetscPrintf(PETSC_COMM_WORLD, " Solution method: %s\n\n", type);
    >>>> // CHKERRQ(ierr);
    >>>> ierr = EPSGetDimensions(eps, &nev, NULL, NULL);  // CHKERRQ(ierr);
    >>>> ierr = PetscPrintf(PETSC_COMM_WORLD,
    >>>>                     " Number of requested eigenvalues: %D\n",
    >>>>                     nev);  // CHKERRQ(ierr);
    >>>> 
    >>>> I am getting the following error. Attached is the entire error file for your reference. Please let me know what should I fix in this code.
    >>>> 
    >>>> 2]PETSC ERROR: Argument out of range
    >>>> [2]PETSC ERROR: Argument 2 out of range
    >>>> [2]PETSC ERROR: See http://www.mcs.anl.gov/petsc/documentation/faq.html for trouble shooting.
    >>>> [2]PETSC ERROR: Petsc Release Version 3.7.4, Oct, 02, 2016
    >>>> [2]PETSC ERROR: ./miniapps on a sandybridge named nid00300 by d3s Wed Jun 14 15:32:00 2017
    >>>> [13]PETSC ERROR: #1 BVDotVec_BLAS_Private() line 272 in /autofs/nccs-svm1_home1/ramki/libraries/slepc-3.7.3/src/sys/classes/bv/interface/bvblas.c
    >>>> [13]PETSC ERROR: #2 BVDotVec_Svec() line 150 in /autofs/nccs-svm1_home1/ramki/libraries/slepc-3.7.3/src/sys/classes/bv/impls/svec/svec.c
    >>>> [13]PETSC ERROR: #3 BVDotVec() line 191 in /autofs/nccs-svm1_home1/ramki/libraries/slepc-3.7.3/src/sys/classes/bv/interface/bvglobal.c
    >>>> [13]PETSC ERROR: #4 BVOrthogonalizeCGS1() line 81 in /autofs/nccs-svm1_home1/ramki/libraries/slepc-3.7.3/src/sys/classes/bv/interface/bvorthog.c
    >>>> [13]PETSC ERROR: #5 BVOrthogonalizeCGS() line 214 in /autofs/nccs-svm1_home1/ramki/libraries/slepc-3.7.3/src/sys/classes/bv/interface/bvorthog.c
    >>>> [13]PETSC ERROR: #6 BVOrthogonalizeColumn() line 371 in /autofs/nccs-svm1_home1/ramki/libraries/slepc-3.7.3/src/sys/classes/bv/interface/bvorthog.c
    >>>> [13]PETSC ERROR: #7 EPSBasicArnoldi() line 59 in /autofs/nccs-svm1_home1/ramki/libraries/slepc-3.7.3/src/eps/impls/krylov/epskrylov.c
    >>>> [13]PETSC ERROR: #8 EPSSolve_KrylovSchur_Default() line 203 in /autofs/nccs-svm1_home1/ramki/libraries/slepc-3.7.3/src/eps/impls/krylov/krylovschur/krylovschur.c
    >>>> [13]PETSC ERROR: #9 EPSSolve() line 101 in /autofs/nccs-svm1_home1/ramki/libraries/slepc-3.7.3/src/eps/interface/epssolve.c
    >>>> 
    >>>> -- 
    >>>> Regards,
    >>>> Ramki
    >>>> 
    >>>> <test.pbs.e613713>
    >>> 
    >>> 
    >>> 
    >>> 
    >>> 
    >>> 
    >> 
    >> 
    >> 
    >> 
    > 
    > 
    > 
    > 
    
    
    

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