[petsc-users] slepc NHEP error
Barry Smith
bsmith at mcs.anl.gov
Wed Jun 14 16:21:04 CDT 2017
Send the file autofs/nccs-svm1_home1/ramki/libraries/slepc-3.7.3/src/sys/classes/bv/interface/bvblas.c as an attachment.
Barry
> On Jun 14, 2017, at 4:17 PM, Kannan, Ramakrishnan <kannanr at ornl.gov> wrote:
>
> Barry,
>
> Appreciate your kind help. It compiles fine. I am still getting the following error.
>
> [0]PETSC ERROR: #1 BVDotVec_BLAS_Private() line 272 in /autofs/nccs-svm1_home1/ramki/libraries/slepc-3.7.3/src/sys/classes/bv/interface/bvblas.c
> [0]PETSC ERROR: #2 BVDotVec_Svec() line 150 in /autofs/nccs-svm1_home1/ramki/libraries/slepc-3.7.3/src/sys/classes/bv/impls/svec/svec.c
> [0]PETSC ERROR: #3 BVDotVec() line 191 in /autofs/nccs-svm1_home1/ramki/libraries/slepc-3.7.3/src/sys/classes/bv/interface/bvglobal.c
> [0]PETSC ERROR: #4 BVOrthogonalizeCGS1() line 81 in /autofs/nccs-svm1_home1/ramki/libraries/slepc-3.7.3/src/sys/classes/bv/interface/bvorthog.c
> [0]PETSC ERROR: #5 BVOrthogonalizeCGS() line 214 in /autofs/nccs-svm1_home1/ramki/libraries/slepc-3.7.3/src/sys/classes/bv/interface/bvorthog.c
> [0]PETSC ERROR: #6 BVOrthogonalizeColumn() line 371 in /autofs/nccs-svm1_home1/ramki/libraries/slepc-3.7.3/src/sys/classes/bv/interface/bvorthog.c
> [0]PETSC ERROR: [8]PETSC ERROR: #1 BVDotVec_BLAS_Private() line 272 in /autofs/nccs-svm1_home1/ramki/libraries/slepc-3.7.3/src/sys/classes/bv/interface/bvblas.c
> [8]PETSC ERROR: #2 BVDotVec_Svec() line 150 in /autofs/nccs-svm1_home1/ramki/libraries/slepc-3.7.3/src/sys/classes/bv/impls/svec/svec.c
> [8]PETSC ERROR: #3 BVDotVec() line 191 in /autofs/nccs-svm1_home1/ramki/libraries/slepc-3.7.3/src/sys/classes/bv/interface/bvglobal.c
> [8]PETSC ERROR: #4 BVOrthogonalizeCGS1() line 81 in /autofs/nccs-svm1_home1/ramki/libraries/slepc-3.7.3/src/sys/classes/bv/interface/bvorthog.c
> [8]PETSC ERROR: #5 BVOrthogonalizeCGS() line 214 in /autofs/nccs-svm1_home1/ramki/libraries/slepc-3.7.3/src/sys/classes/bv/interface/bvorthog.c
> [8]PETSC ERROR: #6 BVOrthogonalizeColumn() line 371 in /autofs/nccs-svm1_home1/ramki/libraries/slepc-3.7.3/src/sys/classes/bv/interface/bvorthog.c
> [8]PETSC ERROR: #7 EPSBasicArnoldi() line 59 in /autofs/nccs-svm1_home1/ramki/libraries/slepc-3.7.3/src/eps/impls/krylov/epskrylov.c
> [8]PETSC ERROR: #8 EPSSolve_KrylovSchur_Default() line 203 in /autofs/nccs-svm1_home1/ramki/libraries/slepc-3.7.3/src/eps/impls/krylov/krylovschur/krylovschur.c
> [8]PETSC ERROR: #9 EPSSolve() line 101 in /autofs/nccs-svm1_home1/ramki/libraries/slepc-3.7.3/src/eps/interface/epssolve.c
> [8]PETSC ERROR: #10 count() line 266 in /lustre/atlas/proj-shared/csc040/gryffin/gryffndor/miniapps/cmake/../algorithms/tricount.hpp
> [2]PETSC ERROR: #1 BVDotVec_BLAS_Private() line 272 in /autofs/nccs-svm1_home1/ramki/libraries/slepc-3.7.3/src/sys/classes/bv/interface/bvblas.c
> [2]PETSC ERROR: #2 BVDotVec_Svec() line 150 in /autofs/nccs-svm1_home1/ramki/libraries/slepc-3.7.3/src/sys/classes/bv/impls/svec/svec.c
> [2]PETSC ERROR: #3 BVDotVec() line 191 in /autofs/nccs-svm1_home1/ramki/libraries/slepc-3.7.3/src/sys/classes/bv/interface/bvglobal.c
> [2]PETSC ERROR: #4 BVOrthogonalizeCGS1() line 81 in /autofs/nccs-svm1_home1/ramki/libraries/slepc-3.7.3/src/sys/classes/bv/interface/bvorthog.c
> [2]PETSC ERROR: #5 BVOrthogonalizeCGS() line 214 in /autofs/nccs-svm1_home1/ramki/libraries/slepc-3.7.3/src/sys/classes/bv/interface/bvorthog.c
> [2]PETSC ERROR: #6 BVOrthogonalizeColumn() line 371 in /autofs/nccs-svm1_home1/ramki/libraries/slepc-3.7.3/src/sys/classes/bv/interface/bvorthog.c
> [2]PETSC ERROR: #7 EPSBasicArnoldi() line 59 in /autofs/nccs-svm1_home1/ramki/libraries/slepc-3.7.3/src/eps/impls/krylov/epskrylov.c
> [2]PETSC ERROR: #8 EPSSolve_KrylovSchur_Default() line 203 in /autofs/nccs-svm1_home1/ramki/libraries/slepc-3.7.3/src/eps/impls/krylov/krylovschur/krylovschur.c
> [2]PETSC ERROR: #9 EPSSolve() line 101 in /autofs/nccs-svm1_home1/ramki/libraries/slepc-3.7.3/src/eps/interface/epssolve.c
> [2]PETSC ERROR: #10 count() line 266 in /lustre/atlas/proj-shared/csc040/gryffin/gryffndor/miniapps/cmake/../algorithms/tricount.hpp
> #7 EPSBasicArnoldi() line 59 in /autofs/nccs-svm1_home1/ramki/libraries/slepc-3.7.3/src/eps/impls/krylov/epskrylov.c
> [0]PETSC ERROR: #8 EPSSolve_KrylovSchur_Default() line 203 in /autofs/nccs-svm1_home1/ramki/libraries/slepc-3.7.3/src/eps/impls/krylov/krylovschur/krylovschur.c
> [0]PETSC ERROR: #9 EPSSolve() line 101 in /autofs/nccs-svm1_home1/ramki/libraries/slepc-3.7.3/src/eps/interface/epssolve.c
> [0]PETSC ERROR: #10 count() line 266 in /lustre/atlas/proj-shared/csc040/gryffin/gryffndor/miniapps/cmake/../algorithms/tricount.hpp
> [7]PETSC ERROR: #1 BVDotVec_BLAS_Private() line 272 in /autofs/nccs-svm1_home1/ramki/libraries/slepc-3.7.3/src/sys/classes/bv/interface/bvblas.c
> [7]PETSC ERROR: #2 BVDotVec_Svec() line 150 in /autofs/nccs-svm1_home1/ramki/libraries/slepc-3.7.3/src/sys/classes/bv/impls/svec/svec.c
> [7]PETSC ERROR: #3 BVDotVec() line 191 in /autofs/nccs-svm1_home1/ramki/libraries/slepc-3.7.3/src/sys/classes/bv/interface/bvglobal.c
> [7]PETSC ERROR: #4 BVOrthogonalizeCGS1() line 81 in /autofs/nccs-svm1_home1/ramki/libraries/slepc-3.7.3/src/sys/classes/bv/interface/bvorthog.c
> [7]PETSC ERROR: #5 BVOrthogonalizeCGS() line 214 in /autofs/nccs-svm1_home1/ramki/libraries/slepc-3.7.3/src/sys/classes/bv/interface/bvorthog.c
> [7]PETSC ERROR: [15]PETSC ERROR: #1 BVDotVec_BLAS_Private() line 272 in /autofs/nccs-svm1_home1/ramki/libraries/slepc-3.7.3/src/sys/classes/bv/interface/bvblas.c
> [15]PETSC ERROR: #2 BVDotVec_Svec() line 150 in /autofs/nccs-svm1_home1/ramki/libraries/slepc-3.7.3/src/sys/classes/bv/impls/svec/svec.c
> [15]PETSC ERROR: #3 BVDotVec() line 191 in /autofs/nccs-svm1_home1/ramki/libraries/slepc-3.7.3/src/sys/classes/bv/interface/bvglobal.c
> [15]PETSC ERROR: #4 BVOrthogonalizeCGS1() line 81 in /autofs/nccs-svm1_home1/ramki/libraries/slepc-3.7.3/src/sys/classes/bv/interface/bvorthog.c
> [15]PETSC ERROR: #5 BVOrthogonalizeCGS() line 214 in /autofs/nccs-svm1_home1/ramki/libraries/slepc-3.7.3/src/sys/classes/bv/interface/bvorthog.c
> [15]PETSC ERROR: #6 BVOrthogonalizeColumn() line 371 in /autofs/nccs-svm1_home1/ramki/libraries/slepc-3.7.3/src/sys/classes/bv/interface/bvorthog.c
> [15]PETSC ERROR: #7 EPSBasicArnoldi() line 59 in /autofs/nccs-svm1_home1/ramki/libraries/slepc-3.7.3/src/eps/impls/krylov/epskrylov.c
> [15]PETSC ERROR: #8 EPSSolve_KrylovSchur_Default() line 203 in /autofs/nccs-svm1_home1/ramki/libraries/slepc-3.7.3/src/eps/impls/krylov/krylovschur/krylovschur.c
> [15]PETSC ERROR: #9 EPSSolve() line 101 in /autofs/nccs-svm1_home1/ramki/libraries/slepc-3.7.3/src/eps/interface/epssolve.c
> [15]PETSC ERROR: #10 count() line 266 in /lustre/atlas/proj-shared/csc040/gryffin/gryffndor/miniapps/cmake/../algorithms/tricount.hpp
> #6 BVOrthogonalizeColumn() line 371 in /autofs/nccs-svm1_home1/ramki/libraries/slepc-3.7.3/src/sys/classes/bv/interface/bvorthog.c
> [7]PETSC ERROR: #7 EPSBasicArnoldi() line 59 in /autofs/nccs-svm1_home1/ramki/libraries/slepc-3.7.3/src/eps/impls/krylov/epskrylov.c
> [7]PETSC ERROR: #8 EPSSolve_KrylovSchur_Default() line 203 in /autofs/nccs-svm1_home1/ramki/libraries/slepc-3.7.3/src/eps/impls/krylov/krylovschur/krylovschur.c
> [7]PETSC ERROR: #9 EPSSolve() line 101 in /autofs/nccs-svm1_home1/ramki/libraries/slepc-3.7.3/src/eps/interface/epssolve.c
> [7]PETSC ERROR: #10 count() line 266 in /lustre/atlas/proj-shared/csc040/gryffin/gryffndor/miniapps/cmake/../algorithms/tricount.hpp
>
> --
> Regards,
> Ramki
>
>
> On 6/14/17, 4:48 PM, "Barry Smith" <bsmith at mcs.anl.gov> wrote:
>
>
>> On Jun 14, 2017, at 3:45 PM, Kannan, Ramakrishnan <kannanr at ornl.gov> wrote:
>>
>> Barry,
>>
>> All the functions here are standard SLEPC functions and there are no user-defined or custom code here. As you can see, when I uncomment the CHKERRQ macros in my code, I am getting the compilation error.
>
> Yes that is because YOUR function that calls the SLEPc functions is void and doesn't return an error code. It is that function I recommend changing to return error codes.
>
> Barry
>
>>
>> --
>> Regards,
>> Ramki
>>
>>
>> On 6/14/17, 4:40 PM, "Barry Smith" <bsmith at mcs.anl.gov> wrote:
>>
>>
>>> On Jun 14, 2017, at 3:33 PM, Kannan, Ramakrishnan <kannanr at ornl.gov> wrote:
>>>
>>> Can I use CHKERRV instead of CHKERRQ? Will that help?
>>
>> You can do that. But I question you having functions in your code that return void instead of an error code. Without error codes you are just hurting your own productivity.
>>
>> Barry
>>
>>>
>>> --
>>> Regards,
>>> Ramki
>>>
>>>
>>> On 6/14/17, 4:25 PM, "Kannan, Ramakrishnan" <kannanr at ornl.gov> wrote:
>>>
>>> I get the following compilation error when I have CHKERRQ.
>>>
>>> /opt/cray/petsc/3.7.4.0/real/GNU64/5.1/sandybridge/include/petscerror.h:433:154: error: return-statement with a value, in function returning 'void' [-fpermissive]
>>> #define CHKERRQ(n) do {if (PetscUnlikely(n)) return PetscError(PETSC_COMM_SELF,__LINE__,PETSC_FUNCTION_NAME,__FILE__,n,PETSC_ERROR_REPEAT," ");} while (0)
>>>
>>>
>>> --
>>> Regards,
>>> Ramki
>>>
>>>
>>> On 6/14/17, 4:14 PM, "Barry Smith" <bsmith at mcs.anl.gov> wrote:
>>>
>>>
>>> Why do you have the CHKERRQ(ierr); commented out in your code?
>>>
>>> Because of this you are getting mangled confusing error messages.
>>>
>>> Put a ierr = in front of all calls and a CHKERRQ(ierr); after each call.
>>>
>>> Then resend the new error message which will be much clearer.
>>>
>>>
>>>
>>>> On Jun 14, 2017, at 2:58 PM, Kannan, Ramakrishnan <kannanr at ornl.gov> wrote:
>>>>
>>>> Hello,
>>>>
>>>> I am running NHEP across 16 MPI processors over 16 nodes in a matrix of global size of 1,000,000x1,000,000 with approximately global 16,000,000 non-zeros. Each node has approximately 1million non-zeros.
>>>>
>>>> The following is my slepc code for EPS.
>>>>
>>>> PetscInt nev;
>>>> ierr = EPSCreate(PETSC_COMM_WORLD, &eps); // CHKERRQ(ierr);
>>>> ierr = EPSSetOperators(eps, A, NULL); // CHKERRQ(ierr);
>>>> ierr = EPSSetProblemType(eps, EPS_NHEP); // CHKERRQ(ierr);
>>>> EPSSetWhichEigenpairs(eps, EPS_LARGEST_REAL);
>>>> EPSSetDimensions(eps, 100, PETSC_DEFAULT, PETSC_DEFAULT);
>>>> PRINTROOT("calling epssolve");
>>>> ierr = EPSSolve(eps); // CHKERRQ(ierr);
>>>> ierr = EPSGetType(eps, &type); // CHKERRQ(ierr);
>>>> ierr = PetscPrintf(PETSC_COMM_WORLD, " Solution method: %s\n\n", type);
>>>> // CHKERRQ(ierr);
>>>> ierr = EPSGetDimensions(eps, &nev, NULL, NULL); // CHKERRQ(ierr);
>>>> ierr = PetscPrintf(PETSC_COMM_WORLD,
>>>> " Number of requested eigenvalues: %D\n",
>>>> nev); // CHKERRQ(ierr);
>>>>
>>>> I am getting the following error. Attached is the entire error file for your reference. Please let me know what should I fix in this code.
>>>>
>>>> 2]PETSC ERROR: Argument out of range
>>>> [2]PETSC ERROR: Argument 2 out of range
>>>> [2]PETSC ERROR: See http://www.mcs.anl.gov/petsc/documentation/faq.html for trouble shooting.
>>>> [2]PETSC ERROR: Petsc Release Version 3.7.4, Oct, 02, 2016
>>>> [2]PETSC ERROR: ./miniapps on a sandybridge named nid00300 by d3s Wed Jun 14 15:32:00 2017
>>>> [13]PETSC ERROR: #1 BVDotVec_BLAS_Private() line 272 in /autofs/nccs-svm1_home1/ramki/libraries/slepc-3.7.3/src/sys/classes/bv/interface/bvblas.c
>>>> [13]PETSC ERROR: #2 BVDotVec_Svec() line 150 in /autofs/nccs-svm1_home1/ramki/libraries/slepc-3.7.3/src/sys/classes/bv/impls/svec/svec.c
>>>> [13]PETSC ERROR: #3 BVDotVec() line 191 in /autofs/nccs-svm1_home1/ramki/libraries/slepc-3.7.3/src/sys/classes/bv/interface/bvglobal.c
>>>> [13]PETSC ERROR: #4 BVOrthogonalizeCGS1() line 81 in /autofs/nccs-svm1_home1/ramki/libraries/slepc-3.7.3/src/sys/classes/bv/interface/bvorthog.c
>>>> [13]PETSC ERROR: #5 BVOrthogonalizeCGS() line 214 in /autofs/nccs-svm1_home1/ramki/libraries/slepc-3.7.3/src/sys/classes/bv/interface/bvorthog.c
>>>> [13]PETSC ERROR: #6 BVOrthogonalizeColumn() line 371 in /autofs/nccs-svm1_home1/ramki/libraries/slepc-3.7.3/src/sys/classes/bv/interface/bvorthog.c
>>>> [13]PETSC ERROR: #7 EPSBasicArnoldi() line 59 in /autofs/nccs-svm1_home1/ramki/libraries/slepc-3.7.3/src/eps/impls/krylov/epskrylov.c
>>>> [13]PETSC ERROR: #8 EPSSolve_KrylovSchur_Default() line 203 in /autofs/nccs-svm1_home1/ramki/libraries/slepc-3.7.3/src/eps/impls/krylov/krylovschur/krylovschur.c
>>>> [13]PETSC ERROR: #9 EPSSolve() line 101 in /autofs/nccs-svm1_home1/ramki/libraries/slepc-3.7.3/src/eps/interface/epssolve.c
>>>>
>>>> --
>>>> Regards,
>>>> Ramki
>>>>
>>>> <test.pbs.e613713>
>>>
>>>
>>>
>>>
>>>
>>>
>>
>>
>>
>>
>
>
>
>
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