[petsc-users] configure fails with batch+scalapack

Santiago Andres Triana repepo at gmail.com
Sun Dec 17 14:29:17 CST 2017


Dear petsc-users,

I'm trying to install petsc in a cluster that uses a job manager.  This is
the configure command I use:

./configure --known-mpi-shared-libraries=1 --with-scalar-type=complex
--with-mumps=1 --download-mumps --download-parmetis
--with-blaslapack-dir=/sw/sdev/intel/psxe2015u3/composer_xe_2015.3.187/mkl
--download-metis --with-scalapack=1 --download-scalapack --with-batch

This fails when including the option --with-batch together with
--download-scalapack:

===============================================================================
             Configuring PETSc to compile on your system

===============================================================================
TESTING: check from
config.libraries(config/BuildSystem/config/libraries.py:158)

 *******************************************************************************
         UNABLE to CONFIGURE with GIVEN OPTIONS    (see configure.log for
details):
-------------------------------------------------------------------------------
Unable to find scalapack in default locations!
Perhaps you can specify with --with-scalapack-dir=<directory>
If you do not want scalapack, then give --with-scalapack=0
You might also consider using --download-scalapack instead
*******************************************************************************


However, if I omit the --with-batch option, the configure script manages to
succeed (it downloads and compiles scalapack; the install fails later at
the make debug because of the job manager). Any help or suggestion is
highly appreciated. Thanks in advance!

Andres
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