[petsc-users] configure error on Titan with Intel

[Ed D'Azevedo]

Is petsc using ACML specific routines?
If not, perhaps MKL provides the lapack/blas and ACML is not needed?

Just a thought.

Ed


On 05/08/2015 12:03 PM, Mark Adams wrote:
> ACML seems to be there and Ed D'Azevedo gave me a module load script 
> that I tried.  I see:
>
> /usr/bin/ld: cannot find -lpetsc-ufod4vtr9mqHvKIQiVAm
>
> And I also still get the failure to find libacml.so
>
> I will try your LD_LIBRARY_PATH suggestion.
>
>
> On Fri, May 8, 2015 at 11:46 AM, Satish Balay <balay at mcs.anl.gov 
> <mailto:balay at mcs.anl.gov>> wrote:
>
>     On Fri, 8 May 2015, Mark Adams wrote:
>
>     > I am getting this error on Titan with Intel programming env.
>     >
>     > I run this from an interactive batch shell to avoid the batch
>     business.
>     >
>     > This workflow seemed to work for pgi & gnu programming envs.
>     >
>     > Any ideas?
>
>     >>>>>
>     ERROR while running executable: Could not execute
>     "/tmp/scratch/petsc-vW7iN1/config.setCompilers/conftest":
>     /tmp/scratch/petsc-vW7iN1/config.setCompilers/conftest: error
>     while loading shared libraries: libacml.so: cannot open shared
>     object file: No such file or directory
>     <<<<<<
>
>     Perhaps ACML module is not setup [or loaded] correctly for intel
>     compilers.
>
>     You can manually set LD_LIBRARY_PATH to its location - and see if the
>     problem goes away.
>
>     Satish
>
>     ---------
>
>     balay at asterix /home/balay/download-pine
>     $ grep LD_LIBRARY_PATH configure.log
>     CRAY_LD_LIBRARY_PATH=/opt/cray/pmi/5.0.5-1.0000.10300.134.8.gem/lib64:/opt/cray/libsci/13.0.1/INTEL/140/interlagos/lib:/opt/cray/netcdf-hdf5parallel/4.3.2/INTEL/140/lib:/opt/cray/mpt/7.0.4/gni/mpich2-intel/140/lib:/opt/cray/alps/5.2.1-2.0502.9479.20.1.gem/lib64:/opt/nvidia/cudatoolkit/5.5.51-1.0502.9594.3.1/lib64:/opt/nvidia/cudatoolkit/5.5.51-1.0502.9594.3.1/extras/CUPTI/lib64:/opt/cray/netcdf-hdf5parallel/4.3.2/PGI/141/lib:/opt/cray/mpt/7.0.4/gni/mpich2-pgi/141/lib:/opt/cray/rca/1.0.0-2.0502.53711.3.125.gem/lib64:/opt/cray/xpmem/0.1-2.0502.55507.3.2.gem/lib64:/opt/cray/dmapp/7.0.1-1.0502.9501.5.211.gem/lib64:/opt/cray/ugni/5.0-1.0502.9685.4.24.gem/lib64:/opt/cray/udreg/2.3.2-1.0502.9275.1.25.gem/lib64:/opt/cray/libsci/13.0.1/PGI/141/x86_64/lib
>     MIC_LD_LIBRARY_PATH=/opt/intel/composer_xe_2013_sp1.2.144/compiler/lib/mic:/opt/intel/composer_xe_2013_sp1.2.144/mpirt/lib/mic:/opt/intel/composer_xe_2013_sp1.2.144/compiler/lib/mic:/opt/intel/composer_xe_2013_sp1.2.144/mkl/lib/mic:/opt/intel/composer_xe_2013_sp1.2.144/tbb/lib/mic
>     LD_LIBRARY_PATH=/opt/intel/composer_xe_2013_sp1.2.144/compiler/lib/intel64:/opt/intel/composer_xe_2013_sp1.2.144/mpirt/lib/intel64:/opt/intel/composer_xe_2013_sp1.2.144/ipp/../compiler/lib/intel64:/opt/intel/composer_xe_2013_sp1.2.144/ipp/lib/intel64:/opt/intel/composer_xe_2013_sp1.2.144/compiler/lib/intel64:/opt/intel/composer_xe_2013_sp1.2.144/mkl/lib/intel64:/opt/intel/composer_xe_2013_sp1.2.144/tbb/lib/intel64/gcc4.1:/sw/xk6/python/2.7.9/sles11.3_gnu4.3.4/lib:/lustre/atlas/sw/xk7/python/2.7.9/sles11.3_gnu4.3.4/lib:/opt/sw/xk6/ddt/4.2-35818/sles11.1_binary/lib/32:/opt/sw/xk6/ddt/4.2-35818/sles11.1_binary/lib/64
>       OpenMPI wrappers require LD_LIBRARY_PATH set
>     balay at asterix /home/balay/download-pine
>     $ grep LD_LIBRARY_PATH configure.log |grep -i acml
>     balay at asterix /home/balay/download-pine
>     $
>
>

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