[petsc-users] Could not find make when building PETSc in Windows 7

[Qin Lu]

Satish,

I followed your suggestion to run "export PATH=/usr/bin:$PATH", now grep, rm, etc., point to those under /usr/bin. I then run configure and make all again, the previous make errors about grep, etc. , were gone! Now the make all ran to the end but gave the error "makefile:24: recipe for target 'all' failed", as shown below.  I opened the error.log and it said

 "/usr/bin/ar: petscvecmod.o: No such file or directory
/usr/bin/cp: cannot stat `*.mod': No such file or directory"

But I checked "which ar" and it returned "/usr/bin/ar", so ar.exe is there.

The error.log and make.log makefile are attached for details.

Thanks for any suggestions,
Qin 

=======  make output ========
libfast in: /cygdrive/c/cygwin_cache/petsc-3.4.2/src/contrib
libfast in: /cygdrive/c/cygwin_cache/petsc-3.4.2/src/contrib/fun3d
libfast in: /cygdrive/c/cygwin_cache/petsc-3.4.2/src/contrib/fun3d/comp
libfast in: /cygdrive/c/cygwin_cache/petsc-3.4.2/src/contrib/fun3d/incomp
libfast in: /cygdrive/c/cygwin_cache/petsc-3.4.2/src/benchmarks
libfast in: /cygdrive/c/cygwin_cache/petsc-3.4.2/include
libfast in: /cygdrive/c/cygwin_cache/petsc-3.4.2/include/finclude
libfast in: /cygdrive/c/cygwin_cache/petsc-3.4.2/include/finclude/ftn-auto
libfast in: /cygdrive/c/cygwin_cache/petsc-3.4.2/include/finclude/ftn-custom
libfast in: /cygdrive/c/cygwin_cache/petsc-3.4.2/include/petsc-private
libfast in: /cygdrive/c/cygwin_cache/petsc-3.4.2/include/sieve
libfast in: /cygdrive/c/cygwin_cache/petsc-3.4.2/tutorials
libfast in: /cygdrive/c/cygwin_cache/petsc-3.4.2/tutorials/python
Completed building libraries
=========================================
**************************ERROR************************************
Error during compile, check arch-mswin-c-opt/conf/make.log
Send it and arch-mswin-c-opt/conf/configure.log to petsc-maint at mcs.anl.gov
*****************************************************************
makefile:24: recipe for target 'all' failedmake: *** [all] Error 1



On Monday, October 28, 2013 11:50 AM, Satish Balay <balay at mcs.anl.gov> wrote:

cygwin should have already setup PATH correctly so that its listed first

What do you have for:

echo $PATH
which make
which rm
which grep
export PATH=/usr/bin:$PATH
which make
which rm
which grep

Satish



On Mon, 28 Oct 2013, Qin Lu wrote:

> Satish,
>  
> As far as I know, cygwin reads the Windows enviromental variable PATH. Can I not change the the setting in in the Windows enviromental variables (since other programs need them), but change the PATH used by cygwin only? Which file should I change?
>  
> Thanks,
> Qin
> 
> 
> 
> On Monday, October 28, 2013 11:16 AM, Satish Balay <balay at mcs.anl.gov> wrote:
>  
> > /cygdrive/c/Windows/SUA/common/rm -f -rf /cygdrive/c/cygwin_cache/petsc-3.4.3/arch-mswin-c-opt/lib/libpetsc*.*
> 
> You appear to have non cygwin stuff in your PATH. Can you remove these
> things from your PATH - make sure grep in PATH is from cygwin - and
> rerun configure && make
> 
> Satish
> 
> 
> 
> On Mon, 28 Oct 2013, Qin Lu wrote:
> 
> > Hi,
> >  
> > The configuration seemed to work, then I ran "make all" but got errors such as "grep: Cannot open file '/dev/fs/C/cygdrive/c/cygwin_cache/petsc-3.4.3/include/petscversion.h': No such file or directory". See the attached error.log and make.log for details.
> >  
> > I confirmed that c:\cygwin_cache\petsc-3.4.3\include\petscversion.h is there. '\The ''/dev/fs/C' part in the directory seems suspicious. Did I missed anything in the setup?
> >  
> > Thanks for any hints,
> > Qin 
> >  
> >  
> > 
> > 
> > 
> > On Thursday, October 24, 2013 2:05 PM, Satish Balay <balay at mcs.anl.gov> wrote:
> >  
> > pushed ee76e990026b11c1f9c153f288b72cc9b8ebb100 and merged to next.
> > 
> > It will go into 'maint' later..
> > 
> > Satish
> > 
> > 
> > On Thu, 24 Oct 2013, Satish Balay wrote:
> > 
> > > Perhaps we should add back the windows-python check?
> > > 
> > > [since we haven't yet added the windows python support]
> > > 
> > > Satish
> > > 
> > > On Thu, 24 Oct 2013, Qin Lu wrote:
> > > 
> > > > Chetan
> > > > 
> > > > Great, that was the problem! I set python point to a copy that was not cygwin's. Now I set it to cygwin's python and it this error is gone! I am waiting to see if the whole building will finish without problems.
> > > > 
> > > > Thanks a lot for all you guys' helps.
> > > > 
> > > > Qin 
> > > > 
> > > > On Thursday, October 24, 2013 11:28 AM, Chetan Jhurani <chetan.jhurani at gmail.com> wrote:
> > > > I vaguely recall seeing the "could not locate make" error
> > > > when a non-cygwin python is picked up first in path.
> > > > So ensure that "which python" points to cygwin python.
> > > > 
> > > > Another issue is that the --with-make argument, if it is
> > > > needed, should be /cygdrive/C/cygwin64/bin (or with some
> > > > other drive letter in between where cygwin is installed).
> > > > 
> > > > Chetan
> > > > 
> > > > 
> > > > > -----Original Message-----
> > > > > From: petsc-users-bounces at mcs.anl.gov [mailto:petsc-users-bounces at mcs.anl.gov] On Behalf Of Qin Lu
> > > > > Sent: Thursday, October 24, 2013 8:43 AM
> > > > > To: Jed Brown; petsc-users at mcs.anl.gov
> > > > > Subject: Re: [petsc-users] Could not find make when building PETSc in Windows 7
> > > > > 
> > > > > Jed,
> > > > > 
> > > > > As I mentioned, I did add C:\cygwin64\bin (where make.exe is) to Path, and also tried to run
> > > > > ./configure --with-cc='win32fe icl' --with-fc='win32fe ifort' --with-cxx='win32fe icl' --with-
> > > > > make=/cygdrive/cygwin64/bin. It did not work, I just tried what you suggested: adding --download-make
> > > > > in confugure, it gave the same error.
> > > > > 
> > > > > Thanks,
> > > > > Qin
> > > > > 
> > > > > 
> > > > > 
> > > > > On Thursday, October 24, 2013 10:36 AM, Jed Brown <jedbrown at mcs.anl.gov> wrote:
> > > > > Qin Lu <lu_qin_2000 at yahoo.com> writes:
> > > > > 
> > > > > > Hello,
> > > > > >
> > > > > > I am trying to build PETSc in Windows 7 with following steps:
> > > > > >
> > > > > > 1. Installed cygwin 64-bit with python, make and other default packages under C:\cygwin64
> > > > > > 2. Added C:\cygwin64\bin to Windows environmental variable Path.
> > > > > > 3. Downloaded and unzipped PETSc 3.4.2.
> > > > > > 4. Run mintty.exe to open a cygwin terminal.
> > > > > > 5. In the cygwin terminal, under PETSc directory, run:  ./configure --with-cc='win32fe icl' --with-
> > > > > fc='win32fe ifort' --with-cxx='win32fe icl'
> > > > > >
> > > > > > However, it gave an error "Could not locate the make utility on your system, make sure it is in your
> > > > > path or use --with-make=/fullpathnameofmake and run ./configure again".  I suppose it should use
> > > > > C:\cygwin64\bin\make.exe, which is already in path, but I still added  --with-
> > > > > make=/cvgdrive/cygwin64/bin in configure's option and run configure again, yet it gave the same error.
> > > > > 
> > > > > You need to pass the full path to the make executable (or add it to your
> > > > > path), or you can use --download-make.
> > > > > 
> > > > > 
> > > > > > What should I do to let configure know the path of make?
> > > > > >
> > > > > > Many thanks for your help,
> > > > > >
> > > > > > Regard,
> > > > > > Qin
> > > > 
> > >        
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