[petsc-users] runtime error for help

Wed Mar 13 13:28:59 CDT 2013

Hello, I'm using petsc-dev to develop a program which involves complex numbers.

With the help from petsc-maint, I have successfully built the PETSc complex version on my system, and am able to run the example  /ksp/ksp/examples/tutorials/ex11.c

Now the problem is I can compile my code successfully:

[d3m956 at olympus v0]$ make
mpicxx -I/pic/projects/ds/petsc-dev/include -I/pic/projects/ds/petsc-dev/arch-complex/include -I/share/apps/openmpi/1.5.4/gcc/4.1.2/include -g -c -o allocMainData.o allocMainData.C
mpicxx -I/pic/projects/ds/petsc-dev/include -I/pic/projects/ds/petsc-dev/arch-complex/include -I/share/apps/openmpi/1.5.4/gcc/4.1.2/include -g -c -o dynSim.o dynSim.C
mpicxx -I/pic/projects/ds/petsc-dev/include -I/pic/projects/ds/petsc-dev/arch-complex/include -I/share/apps/openmpi/1.5.4/gcc/4.1.2/include -g -c -o readInput.o readInput.C
mpicxx -I/pic/projects/ds/petsc-dev/include -I/pic/projects/ds/petsc-dev/arch-complex/include -I/share/apps/openmpi/1.5.4/gcc/4.1.2/include -g -c -o bcastGlobals.o bcastGlobals.C
mpicxx -I/pic/projects/ds/petsc-dev/include -I/pic/projects/ds/petsc-dev/arch-complex/include -I/share/apps/openmpi/1.5.4/gcc/4.1.2/include -g -c -o admitBuild.o admitBuild.C
mpicxx -o dynSim allocMainData.o dynSim.o readInput.o bcastGlobals.o admitBuild.o  -L/pic/projects/ds/petsc-dev/arch-complex/lib  -lpetsc -llapack -lblas -lX11 -lpthread -Wl,-rpath,/share/apps/openmpi/1.5.4/gcc/4.1.2/lib -L/share/apps/openmpi/1.5.4/gcc/4.1.2/lib -Wl,-rpath,/usr/lib/gcc/x86_64-redhat-linux/4.1.2 -L/usr/lib/gcc/x86_64-redhat-linux/4.1.2 -lmpi_f90 -lmpi_f77 -lgfortran -lm -lm -lm -lm -lmpi_cxx -lstdc++ -lmpi_cxx -lstdc++ -ldl -lmpi -lnsl -lutil -lgcc_s -lpthread -ldl

However, when I ran the code, I got several Error Messages as well as some results during the runtime as shown below:

[d3m956 at olympus v0]$ mpirun -n 1 dynSim -i d100.txt
Number of buses: 290
Number of branches: 907
Number of swing buses: 1
Number of PQ buses: 190
Number of PV buses: 99
Number of generators: 100
Number of switches: 7
Initialization time: 0.00221014
Alloc main data time: 0.00632787
Read input data time: 0.0415301
[0]PETSC ERROR: --------------------- Error Message ------------------------------------
[0]PETSC ERROR: Object is in wrong state!
[0]PETSC ERROR: Must call MatXXXSetPreallocation() or MatSetUp() on argument 1 "mat" before MatSetValues()!
[0]PETSC ERROR: ------------------------------------------------------------------------
[0]PETSC ERROR: Petsc Development HG revision: 6e0ddc6e9b6d8a9d8eb4c0ede0105827a6b58dfb  HG Date: Mon Mar 11 22:54:30 2013 -0500
[0]PETSC ERROR: See docs/changes/index.html for recent updates.
[0]PETSC ERROR: See docs/faq.html for hints about trouble shooting.
[0]PETSC ERROR: See docs/index.html for manual pages.
[0]PETSC ERROR: ------------------------------------------------------------------------
[0]PETSC ERROR: dynSim on a arch-complex named olympus.local by d3m956 Tue Mar 12 15:33:32 2013
[0]PETSC ERROR: Libraries linked from /pic/projects/ds/petsc-dev/arch-complex/lib
[0]PETSC ERROR: Configure run at Tue Mar 12 14:32:37 2013
[0]PETSC ERROR: Configure options --with-scalar-type=complex --with-clanguage=C++ PETSC_ARCH=arch-complex --with-fortran-kernels=generic
[0]PETSC ERROR: ------------------------------------------------------------------------
[0]PETSC ERROR: MatSetValues() line 1061 in src/mat/interface/matrix.c
[0]PETSC ERROR: buildYshMatrix() line 216 in "unknowndirectory/"admitBuild.C
[0]PETSC ERROR: --------------------- Error Message ------------------------------------
[0]PETSC ERROR: Object is in wrong state!
[0]PETSC ERROR: Must call MatXXXSetPreallocation() or MatSetUp() on argument 1 "mat" before MatSetValues()!
[0]PETSC ERROR: ------------------------------------------------------------------------
[0]PETSC ERROR: Petsc Development HG revision: 6e0ddc6e9b6d8a9d8eb4c0ede0105827a6b58dfb  HG Date: Mon Mar 11 22:54:30 2013 -0500
[0]PETSC ERROR: See docs/changes/index.html for recent updates.
[0]PETSC ERROR: See docs/faq.html for hints about trouble shooting.
[0]PETSC ERROR: See docs/index.html for manual pages.
[0]PETSC ERROR: ------------------------------------------------------------------------
[0]PETSC ERROR: dynSim on a arch-complex named olympus.local by d3m956 Tue Mar 12 15:33:32 2013
[0]PETSC ERROR: Libraries linked from /pic/projects/ds/petsc-dev/arch-complex/lib
[0]PETSC ERROR: Configure run at Tue Mar 12 14:32:37 2013
[0]PETSC ERROR: Configure options --with-scalar-type=complex --with-clanguage=C++ PETSC_ARCH=arch-complex --with-fortran-kernels=generic
[0]PETSC ERROR: ------------------------------------------------------------------------
[0]PETSC ERROR: MatSetValues() line 1061 in src/mat/interface/matrix.c
[0]PETSC ERROR: buildConnectMatrix() line 281 in "unknowndirectory/"admitBuild.C
[0]PETSC ERROR: --------------------- Error Message ------------------------------------
[0]PETSC ERROR: Object is in wrong state!
[0]PETSC ERROR: Not for unassembled matrix!
[0]PETSC ERROR: ------------------------------------------------------------------------
[0]PETSC ERROR: Petsc Development HG revision: 6e0ddc6e9b6d8a9d8eb4c0ede0105827a6b58dfb  HG Date: Mon Mar 11 22:54:30 2013 -0500
[0]PETSC ERROR: See docs/changes/index.html for recent updates.
[0]PETSC ERROR: See docs/faq.html for hints about trouble shooting.
[0]PETSC ERROR: See docs/index.html for manual pages.
[0]PETSC ERROR: ------------------------------------------------------------------------
[0]PETSC ERROR: dynSim on a arch-complex named olympus.local by d3m956 Tue Mar 12 15:33:32 2013
[0]PETSC ERROR: Libraries linked from /pic/projects/ds/petsc-dev/arch-complex/lib
[0]PETSC ERROR: Configure run at Tue Mar 12 14:32:37 2013
[0]PETSC ERROR: Configure options --with-scalar-type=complex --with-clanguage=C++ PETSC_ARCH=arch-complex --with-fortran-kernels=generic
[0]PETSC ERROR: ------------------------------------------------------------------------
[0]PETSC ERROR: MatDuplicate() line 4039 in src/mat/interface/matrix.c
[0]PETSC ERROR: buildDiagMatrices() line 331 in "unknowndirectory/"admitBuild.C
[0]PETSC ERROR: --------------------- Error Message ------------------------------------
[0]PETSC ERROR: Invalid argument!
[0]PETSC ERROR: Wrong type of object: Parameter # 1!
[0]PETSC ERROR: ------------------------------------------------------------------------
[0]PETSC ERROR: Petsc Development HG revision: 6e0ddc6e9b6d8a9d8eb4c0ede0105827a6b58dfb  HG Date: Mon Mar 11 22:54:30 2013 -0500
[0]PETSC ERROR: See docs/changes/index.html for recent updates.
[0]PETSC ERROR: See docs/faq.html for hints about trouble shooting.
[0]PETSC ERROR: See docs/index.html for manual pages.
[0]PETSC ERROR: ------------------------------------------------------------------------
[0]PETSC ERROR: dynSim on a arch-complex named olympus.local by d3m956 Tue Mar 12 15:33:32 2013
[0]PETSC ERROR: Libraries linked from /pic/projects/ds/petsc-dev/arch-complex/lib
[0]PETSC ERROR: Configure run at Tue Mar 12 14:32:37 2013
[0]PETSC ERROR: Configure options --with-scalar-type=complex --with-clanguage=C++ PETSC_ARCH=arch-complex --with-fortran-kernels=generic
[0]PETSC ERROR: ------------------------------------------------------------------------
[0]PETSC ERROR: MatMatMult() line 8516 in src/mat/interface/matrix.c
[0]PETSC ERROR: buildMatrix() line 107 in "unknowndirectory/"admitBuild.C
[0]PETSC ERROR: buildAdmittanceMatrix() line 66 in "unknowndirectory/"dynSim.h
Build admittance matrix time: 0.00370693

Can anyone give me a shot what might be a reason for errors like this?

[0]PETSC ERROR: Object is in wrong state!
[0]PETSC ERROR: Must call MatXXXSetPreallocation() or MatSetUp() on argument 1 "mat" before MatSetValues()!
[0]PETSC ERROR: MatSetValues() line 1061 in src/mat/interface/matrix.c
[0]PETSC ERROR: buildYshMatrix() line 216 in "unknowndirectory/"admitBuild.C

Thanks,
Shuangshuang

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