[petsc-users] PT-SCOTCH not available

Satish Balay balay at mcs.anl.gov
Thu Oct 25 19:40:41 CDT 2012


do 'rm -rf externalpackages linux-gnu-c-debug' and retry configure.

If you still have issues - send configure.log to petsc-maint

Satish


On Fri, 26 Oct 2012, Jinquan Zhong wrote:

> The log file says:
> 
> *******************************************************************************
>          UNABLE to CONFIGURE with GIVEN OPTIONS    (see configure.log for details):
> -------------------------------------------------------------------------------
> Downloaded ptscotch could not be used. Please check install in /data/Users/jzhong/petsc-3.3-p3-option4p2/linux-gnu-c-debug
> *******************************************************************************
> 
>   File "./config/configure.py", line 311, in petsc_configure
>     framework.configure(out = sys.stdout)
>   File "/data/Users/jzhong/petsc-3.3-p3-option4p2/config/BuildSystem/config/framework.py", line 933, in configure
>     child.configure()
>   File "/data/Users/jzhong/petsc-3.3-p3-option4p2/config/BuildSystem/config/package.py", line 526, in configure
>     self.executeTest(self.configureLibrary)
>   File "/data/Users/jzhong/petsc-3.3-p3-option4p2/config/BuildSystem/config/base.py", line 115, in executeTest
>     ret = apply(test, args,kargs)
>   File "/data/Users/jzhong/petsc-3.3-p3-option4p2/config/BuildSystem/config/package.py", line 453, in configureLibrary
>     for location, directory, lib, incl in self.generateGuesses():
>   File "/data/Users/jzhong/petsc-3.3-p3-option4p2/config/BuildSystem/config/package.py", line 235, in generateGuesses
>     raise RuntimeError('Downloaded '+self.package+' could not be used. Please check install in '+d+'\n')
> 
> 
> 
> Jinquan
> 
> 
> 
> -----Original Message-----
> From: petsc-users-bounces at mcs.anl.gov [mailto:petsc-users-bounces at mcs.anl.gov] On Behalf Of Jinquan Zhong
> Sent: Thursday, October 25, 2012 5:31 PM
> To: 'PETSc users list'
> Subject: Re: [petsc-users] PT-SCOTCH not available
> 
> I got this
> 
> 
> ===============================================================================                             
> TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:133)                            
> *******************************************************************************
>          UNABLE to CONFIGURE with GIVEN OPTIONS    (see configure.log for details):
> -------------------------------------------------------------------------------
> Downloaded ptscotch could not be used. Please check install in /data/Users/jzhong/petsc-3.3-p3-option4p2/linux-gnu-c-debug
> 
> Not quite working yet.
> 
> Jinquan
> 
> 
> -----Original Message-----
> From: petsc-users-bounces at mcs.anl.gov [mailto:petsc-users-bounces at mcs.anl.gov] On Behalf Of Satish Balay
> Sent: Thursday, October 25, 2012 5:14 PM
> To: PETSc users list
> Subject: Re: [petsc-users] PT-SCOTCH not available
> 
> try using the attached patch and see if it works.
> 
> patch -Np1 < mumps-ptscotch.py
> rm -rf externalpackages/scotch*
> ./configure ....
> 
> Satish
> 
> On Thu, 25 Oct 2012, Jinquan Zhong wrote:
> 
> > Yes, I used
> > 
> > ./configure \
> > --with-blas-lib=/data/Users/jzhong/scalapack-2.0.1/lib/librefblas.a  \ 
> > --with-lapack-lib=/data/Users/jzhong/scalapack-2.0.1/lib/libreflapack.
> > a  \ --download-blacs --download-scalapack \
> > --with-mpi-dir=/data/Users/jzhong/mpich2 \ 
> > --with-mpiexec=/data/Users/jzhong/mpich2/bin/mpiexec \ 
> > --with-cmake=/data/Users/jzhong/CMAKE/cmake-2.8.8/bin/cmake \ 
> > --with-scalar-type=complex --with-precision=double --with-clanguage=c 
> > --with-fortran-kernels=generic \
> > --with-ptscotch=1 --download-ptscotch=yes \ --download-mumps 
> > --download-superlu_dist \ --download-parmetis --download-metis 
> > --with-fortran-interfaces
> > 
> > Jinquan
> > 
> > 
> > -----Original Message-----
> > From: petsc-users-bounces at mcs.anl.gov 
> > [mailto:petsc-users-bounces at mcs.anl.gov] On Behalf Of Satish Balay
> > Sent: Thursday, October 25, 2012 3:49 PM
> > To: PETSc users list
> > Subject: Re: [petsc-users] PT-SCOTCH not available
> > 
> > do you also have parmetis installed?
> > 
> > Satish
> > 
> > On Thu, 25 Oct 2012, Jinquan Zhong wrote:
> > 
> > > Dear PETSc folks,
> > > 
> > > I am trying to install PT-SCOTCH as the external package for PETSc.  I used
> > >                 --with-ptscotch=1
> > > --download-ptscotch=yes
> > > 
> > > to install PETSc.  No complains.
> > > 
> > > But when I tried to use PT-SCOTCH, here is the message I got ...
> > > ZMUMPS 4.10.0
> > > L U Solver for unsymmetric matrices
> > > Type of parallelism: Working host
> > > 
> > > ****** ANALYSIS STEP ********
> > > 
> > > PT-SCOTCH not available.
> > > Aborting.
> > > ...
> > > 
> > > Any idea to make it work?
> > > 
> > > Thanks,
> > > 
> > > Jinquan
> > > 
> > 
> > 
> 



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