[petsc-users] Matrix format mpiaij does not have a built-in PETSc XXX!
Aron Roland
roland at wb.tu-darmstadt.de
Tue Feb 28 03:04:10 CST 2012
Hi Bojan,
the PCILU package does not work with mpiaij matrices, same as PCICC.
Basically only PCSOR works.
You can install the hypre package then you can use the hypre solvers
that also include an ILU PC names BILUT, however I did not had any
success to achieve convergence, even if my SPARSKIT ILU-BCGSTAB
converges very well.
Hope this helped.
Cheers
Aron
On 02/28/2012 08:47 AM, Bojan Niceno wrote:
> Dear all,
>
>
> Max may be correct, but I encounter the same problem as Aron. Neither
> PCILU nor PCICC work in parallel for me. Here is the message I get:
>
> [0]PETSC ERROR: --------------------- Error Message
> ------------------------------------
> [0]PETSC ERROR: No support for this operation for this object type!
> [0]PETSC ERROR: Matrix format mpiaij does not have a built-in PETSc ICC!
> [0]PETSC ERROR:
> ------------------------------------------------------------------------
> [0]PETSC ERROR: Petsc Release Version 3.2.0, Patch 6, Wed Jan 11
> 09:28:45 CST 2012
> [0]PETSC ERROR: See docs/changes/index.html for recent updates.
> [0]PETSC ERROR: See docs/faq.html for hints about trouble shooting.
> [0]PETSC ERROR: See docs/index.html for manual pages.
>
> Portion of the code which I use to set the solver contents follows (I
> am aiming at CG+ICC combination):
>
> /* Create KPS content */
> KSPCreate(PETSC_COMM_WORLD, &ksp);
> KSPSetType(ksp ,KSPCG);
>
> /* Set operators */
> KSPSetOperators(ksp, A, A, DIFFERENT_NONZERO_PATTERN);
>
> /* Linear solver defaults (can be ove-ridden) */
> KSPGetPC(ksp, &pc);
> PCSetType(pc, PCICC);
> KSPSetTolerances(ksp, 1.e-5, PETSC_DEFAULT, PETSC_DEFAULT,
> PETSC_DEFAULT);
>
> /* Run-time options (over-rides above) */
> KSPSetFromOptions(ksp);
>
> What is going wrong here?
>
>
> Kind regards,
>
>
> Bojan
>
>
> On 2/26/2012 6:17 PM, Matthew Knepley wrote:
>> On Sun, Feb 26, 2012 at 10:48 AM, Max Rudolph <maxwellr at gmail.com
>> <mailto:maxwellr at gmail.com>> wrote:
>>
>> MPIAIJ and SEQQIJ matrices are subtypes of the AIJ matrix type.
>> Looking at that table, you should be able to use any of the PCs
>> that supports AIJ and has an X under 'parallel'.
>>
>>
>> Max is correct. For instance, the most popular general purpose
>> parallel solver is ASM (Additive Schwarz Method), which then
>> has a sequential subsolver for each block, which defaults to ILU.
>>
>> Matt
>>
>> Max
>>
>>
>> On Sun, Feb 26, 2012 at 8:16 AM, Aron Roland <aaronroland at gmx.de
>> <mailto:aaronroland at gmx.de>> wrote:
>>
>> Dear All,
>>
>> I hope somebody can help us on this or give at least some
>> clearance.
>>
>> We have just included PETSc as an solver for our sparse
>> matrix evolving from an unstructured mesh advection scheme.
>>
>> The problem is that we are using the mpiaij matrix type,
>> since our matrix is naturally sparse. However it seems that
>> PETSc has no PC for this, except the PCSOR, which showed to
>> be not very effective for our problem.
>>
>> All others give the error msg. of the mail subject, where XXX
>> are the different PC tried.
>>
>> The manual is a bit diffuse on this e.g.
>>
>> http://www.mcs.anl.gov/petsc/documentation/linearsolvertable.html
>>
>> it is claimed that certain PC's are running on aij matrices
>> ... but these are to be defined either as seq. or parallel
>> (mpiaij) matrices. Moreover in the above mentioned list are
>> two columns parallel/seriel, what is the intention of
>> parallel capability when not applicable to matrices stored
>> within the parallel mpiaij framework.
>>
>> I guess we just not understanding the concept or have some
>> other difficulties of understanding of all this.
>>
>> Any comments help is welcome
>>
>> Aron
>>
>>
>>
>>
>>
>> --
>> What most experimenters take for granted before they begin their
>> experiments is infinitely more interesting than any results to which
>> their experiments lead.
>> -- Norbert Wiener
>
>
> --
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