[petsc-users] petsc 3.2-p5 test error

[Mohamed Adel]

Dear all,

I'm trying to compile petsc version 3.2-p5 with IntelMPI-3.2.
The configuration and compilation goes fine, while the test crashes with the following error.
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$ make PETSC_DIR=/opt/petsc-3.2-p5/intel test
Running test examples to verify correct installation
Using PETSC_DIR=/opt/petsc-3.2-p5/intel and PETSC_ARCH=arch-linux2-c-debug
C/C++ example src/snes/examples/tutorials/ex19 run successfully with 1 MPI process
Possible error running C/C++ src/snes/examples/tutorials/ex19 with 2 MPI processes
See http://www.mcs.anl.gov/petsc/petsc-as/documentation/faq.html
lid velocity = 0.0016, prandtl # = 1, grashof # = 1
[0]PETSC ERROR: Petsc_DelComm() line 430 in src/sys/objects/pinit.c
[1]PETSC ERROR: Petsc_DelComm() line 430 in src/sys/objects/pinit.c
[1]PETSC ERROR: PetscSubcommCreate_interlaced() line 288 in src/sys/objects/subcomm.c
[1]PETSC ERROR: PetscSubcommSetType() line 71 in src/sys/objects/subcomm.c
[1]PETSC ERROR: PCSetUp_Redundant() line 77 in src/ksp/pc/impls/redundant/redundant.c
[1]PETSC ERROR: PCSetUp() line 819 in src/ksp/pc/interface/precon.c
[1]PETSC ERROR: KSPSetUp() line 260 in src/ksp/ksp/interface/itfunc.c
[1]PETSC ERROR: PCSetUp_MG() line 678 in src/ksp/pc/impls/mg/mg.c
[1]PETSC ERROR: PCSetUp() line 819 in src/ksp/pc/interface/precon.c
[1]PETSC ERROR: KSPSetUp() line 260 in src/ksp/ksp/interface/itfunc.c
[1]PETSC ERROR: KSPSolve() line 379 in src/ksp/ksp/interface/itfunc.c
[1]PETSC ERROR: SNES_KSPSolve() line 3396 in src/snes/interface/snes.c
[1]PETSC ERROR: SNESSolve_LS() line 190 in src/snes/impls/ls/ls.c
[1]PETSC ERROR: SNESSolve() line 2676 in src/snes/interface/snes.c
[1]PETSC ERROR: DMMGSolveSNES() line 540 in src/snes/utils/damgsnes.c
[1]PETSC ERROR: DMMGSolve() line 331 in src/snes/utils/damg.c
[1]PETSC ERROR: main() line 160 in src/snes/examples/tutorials/ex19.c
[cli_1]: aborting job:
application called MPI_Abort(MPI_COMM_WORLD, 805896965) - process 1
[0]PETSC ERROR: PetscSubcommCreate_interlaced() line 288 in src/sys/objects/subcomm.c
[0]PETSC ERROR: PetscSubcommSetType() line 71 in src/sys/objects/subcomm.c
[0]PETSC ERROR: PCSetUp_Redundant() line 77 in src/ksp/pc/impls/redundant/redundant.c
[0]PETSC ERROR: PCSetUp() line 819 in src/ksp/pc/interface/precon.c
[0]PETSC ERROR: KSPSetUp() line 260 in src/ksp/ksp/interface/itfunc.c
[0]PETSC ERROR: PCSetUp_MG() line 678 in src/ksp/pc/impls/mg/mg.c
[0]PETSC ERROR: PCSetUp() line 819 in src/ksp/pc/interface/precon.c
[0]PETSC ERROR: KSPSetUp() line 260 in src/ksp/ksp/interface/itfunc.c
[0]PETSC ERROR: KSPSolve() line 379 in src/ksp/ksp/interface/itfunc.c
[0]PETSC ERROR: SNES_KSPSolve() line 3396 in src/snes/interface/snes.c
[0]PETSC ERROR: SNESSolve_LS() line 190 in src/snes/impls/ls/ls.c
[0]PETSC ERROR: SNESSolve() line 2676 in src/snes/interface/snes.c
[0]PETSC ERROR: DMMGSolveSNES() line 540 in src/snes/utils/damgsnes.c
[0]PETSC ERROR: DMMGSolve() line 331 in src/snes/utils/damg.c
[0]PETSC ERROR: main() line 160 in src/snes/examples/tutorials/ex19.c
[cli_0]: aborting job:
application called MPI_Abort(MPI_COMM_WORLD, 590597) - process 0
rank 1 in job 50  login02.local_33989   caused collective abort of all ranks
  exit status of rank 1: return code 5
Fortran example src/snes/examples/tutorials/ex5f run successfully with 1 MPI process
Completed test example
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Any idea about what might be wrong with the test?
I configured petsc with the following configurations.
./configure --prefix=/opt/petsc-3.2-p5/intel --with-shared-libraries=1 --with-blas-lapack-dir=/opt/intel/Compiler/11.0/074/mkl/lib/em64t


thanks in advance,
--ma