[petsc-users] [petsc-dev] configure option missing for MPI.h / on IBM machine

[Barry Smith]

  Aron,

   Shouldn't the mpcc and mpfort manage providing the include directories and libraries automatically (like everyone elses mpicc etc does?) Seems very cumbersome that users need to know they strange directories and include them themselves? A real step backwards in usability?

    Barry

On Feb 10, 2011, at 7:44 AM, Aron Ahmadia wrote:

> add opt/ibmhpc/ppe.poe/include/ibmmpi/ to your ./configure options like this:  
> 
> --with-mpi-include=/opt/ibmhpc/ppe.poe/include/ibmmpi/
> 
> You may have to manually add the MPI libraries and their path as well, since BuildSystem tends to like these packaged together.  Ping the list back if you can't figure it out from there.
> 
> -Aron
> 
> On Thu, Feb 10, 2011 at 3:23 PM, lvankampenhout at gmail.com <lvankampenhout at gmail.com> wrote:
> Hi all, i'm having this error when configuring the latest petsc-dev on an IBM PPC system. 
> 
> 
> TESTING: CxxMPICheck from config.packages.MPI(/gpfs/h01/vkampenh/install/petsc-dev/config/BuildSystem/config/packages/MPI.py:611)
> *******************************************************************************
>          UNABLE to CONFIGURE with GIVEN OPTIONS    (see configure.log for details):
> -------------------------------------------------------------------------------
> C++ error! mpi.h could not be located at: []
> *******************************************************************************
> 
> 
> My configure options: ./configure --with-batch=1 --with-mpi-shared=0 --with-endian=big --with-memcmp-ok --sizeof-void-p=8 --sizeof-char=1 --sizeof-short=2 --sizeof-int=4 --sizeof-long=8 --sizeof-size-t=8 --sizeof-long-long=8 --sizeof-float=4 --sizeof-double=8 --bits-per-byte=8 --sizeof-MPI-Comm=8 --sizeof-MPI-Fint=4 --have-mpi-long-double=1 --with-f90-interface=rs6000 --with-cc="mpcc -compiler xlc_r -q64" --with-fc="mpfort -compiler xlf_r -q64" --FFLAGS="-O3 -qhot -qstrict -qarch=auto -qtune=auto" --CFLAGS="-O3 -qhot -qstrict -qarch=auto -qtune=auto" --LIBS=-lmass_64 --with-ar=/usr/bin/ar --prefix=/sara/sw/petsc/3.0.0-p8/real --with-scalar-type=real PETSC_ARCH=linux-ibm-pwr6-xlf-real-64 --with-shared=0 -with-debugging=0 --download-ml --download-hypre
> 
> 
> vkampenh at p6012:~/install/petsc-dev> module list
> Currently Loaded Modulefiles:
>  1) compilerwrappers/yes  4) c++/ibm/11.1          7) upc/ibm/11.1         
>  2) java/ibm/1.5          5) fortran/ibm/13.1     
>  3) c/ibm/11.1            6) sara                 
> 
> 
> vkampenh at p6012:~/install/petsc-dev> locate mpi.h
> /opt/ibm/java2-ppc64-50/include/jvmpi.h
> /opt/ibmhpc/ppe.poe/include/ibmmpi/mpi.h
> /opt/mpich/include/mpi.h
> /usr/include/boost/mpi.hpp
> /usr/lib64/gcc/powerpc64-suse-linux/4.3/include/jvmpi.h
> /usr/lib64/mpi/gcc/openmpi/include/mpi.h
> /usr/lib64/mpi/gcc/openmpi/include/openmpi/ompi/mpi/f77/prototypes_mpi.h
> /usr/src/linux-2.6.32.27-0.2-obj/ppc64/default/include/config/usb/serial/siemens/mpi.h
> /usr/src/linux-2.6.32.27-0.2-obj/ppc64/ppc64/include/config/usb/serial/siemens/mpi.h
> /usr/src/linux-2.6.32.27-0.2-obj/ppc64/trace/include/config/usb/serial/siemens/mpi.h
> /usr/src/linux-2.6.32.27-0.2/drivers/message/fusion/lsi/mpi.h
> 
> 
> Is there an easy way to add the IBMHPC/PPE.POE directory to the configure list, so that it will be recognized? The machine uses LoadLeveler schedule system, which handles the MPI settings. 
> 
> Thanks, 
> Leo
> 
> 
>