[petsc-users] installation correct?

[Satish Balay]

yes - you have a valid install. You can ignore the gfortran warnings

[if you wish to eliminate them - you can use FFLAGS=-Wno-line-truncation with configure]

Satish

On Thu, 16 Dec 2010, enjoywm at cs.wm.edu wrote:

> Hi,
> After make test, I got the following output.
> I want to make sure if the installation is correct.
> 
> Thanks.
> 
> Yixun
> 
> command:
> /petsc-3.1-p6> make PETSC_DIR=/yliu/MyVC/petsc-3.1-p6
> PETSC_ARCH=linux-gnu-c-debug test
> 
> 
> ******************************************output****************************************************************
> Running test examples to verify correct installation
> C/C++ example src/snes/examples/tutorials/ex19 run successfully with 1 MPI
> process
> C/C++ example src/snes/examples/tutorials/ex19 run successfully with 2 MPI
> processes
> --------------Error detected during compile or link!-----------------------
> See http://www.mcs.anl.gov/petsc/petsc-2/documentation/troubleshooting.html
> /yliu/MPICH2/bin/mpif90 -c  -Wall -Wno-unused-variable -g  
> -I/yliu/MyVC/petsc-3.1-p6/linux-gnu-c-debug/include
> -I/yliu/MyVC/petsc-3.1-p6/include
> -I/yliu/MyVC/petsc-3.1-p6/linux-gnu-c-debug/include -I/yliu/MPICH2/include
>   -I/yliu/MyVC/petsc-3.1-p6/linux-gnu-c-debug/include
> -I/yliu/MyVC/petsc-3.1-p6/linux-gnu-c-debug/include -I/yliu/MPICH2/include
>    -o ex5f.o ex5f.F
> ex5f.F:92.72:
> 
>       call PetscOptionsGetReal(PETSC_NULL_CHARACTER,'-par',lambda,
>                                                                         1
> Warning: Line truncated at (1)
> ex5f.F:113.72:
> 
>       call DACreate2d(PETSC_COMM_WORLD,DA_NONPERIODIC,DA_STENCIL_STAR,
>                                                                         1
> Warning: Line truncated at (1)
> ex5f.F:114.72:
> 
>      &     i4,i4,PETSC_DECIDE,PETSC_DECIDE,i1,i1,PETSC_NULL_INTEGER,
>                                                                         1
> Warning: Line truncated at (1)
> ex5f.F:125.72:
> 
>       call DAGetInfo(da,PETSC_NULL_INTEGER,mx,my,PETSC_NULL_INTEGER,
>                                                                         1
> Warning: Line truncated at (1)
> ex5f.F:126.72:
> 
>      &               PETSC_NULL_INTEGER,PETSC_NULL_INTEGER,
>                                                                         1
> Warning: Line truncated at (1)
> ex5f.F:127.72:
> 
>      &               PETSC_NULL_INTEGER,PETSC_NULL_INTEGER,
>                                                                         1
> Warning: Line truncated at (1)
> ex5f.F:128.72:
> 
>      &               PETSC_NULL_INTEGER,PETSC_NULL_INTEGER,
>                                                                         1
> Warning: Line truncated at (1)
> ex5f.F:130.72:
> 
>       call DAGetCorners(da,xs,ys,PETSC_NULL_INTEGER,xm,ym,
>                                                                         1
> Warning: Line truncated at (1)
> ex5f.F:132.72:
> 
>       call DAGetGhostCorners(da,gxs,gys,PETSC_NULL_INTEGER,gxm,gym,
>                                                                         1
> Warning: Line truncated at (1)
> ex5f.F:188.72:
> 
>       call SNESSetJacobian(snes,A,J,SNESDAComputeJacobian,
>                                                                         1
> Warning: Line truncated at (1)
> ex5f.F:344.72:
> 
>             if (i .eq. 1 .or. j .eq. 1
>                                                                         1
> Warning: Line truncated at (1)
> ex5f.F:348.72:
> 
>               x(i,j) = temp1 *
>                                                                         1
> Warning: Line truncated at (1)
> ex5f.F:412.72:
> 
>             if (i .eq. 1 .or. j .eq. 1
>                                                                         1
> Warning: Line truncated at (1)
> ex5f.F:417.72:
> 
>                uxx = hydhx * (two*u
>                                                                         1
> Warning: Line truncated at (1)
> ex5f.F:517.72:
> 
>             if (i .eq. 1 .or. j .eq. 1
>                                                                         1
> Warning: Line truncated at (1)
> ex5f.F:522.72:
> 
>                call MatSetValuesLocal(jac,i1,row,i1,col,v,
>                                                                         1
> Warning: Line truncated at (1)
> ex5f.F:528.72:
> 
>                v(3) = two*(hydhx + hxdhy)
>                                                                         1
> Warning: Line truncated at (1)
> ex5f.F:537.72:
> 
>                call MatSetValuesLocal(jac,i1,row,i5,col,v,
>                                                                         1
> Warning: Line truncated at (1)
> /yliu/MPICH2/bin/mpif90 -Wall -Wno-unused-variable -g   -o ex5f ex5f.o
> -Wl,-rpath,/yliu/MyVC/petsc-3.1-p6/linux-gnu-c-debug/lib
> -L/yliu/MyVC/petsc-3.1-p6/linux-gnu-c-debug/lib -lpetsc  -lX11
> -Wl,-rpath,/yliu/MyVC/petsc-3.1-p6/linux-gnu-c-debug/lib
> -L/yliu/MyVC/petsc-3.1-p6/linux-gnu-c-debug/lib -lparmetis -lmetis
> -lflapack -lfblas -lm -L/yliu/MPICH2/lib
> -L/usr/lib64/gcc/x86_64-suse-linux/4.5 -L/usr/x86_64-suse-linux/lib -ldl
> -lmpich -lopa -lmpl -lrt -lpthread -lgcc_s -lmpichf90 -lgfortran -lm -lm
> -ldl -lmpich -lopa -lmpl -lrt -lpthread -lgcc_s -ldl
> /bin/rm -f ex5f.o
> Fortran example src/snes/examples/tutorials/ex5f run successfully with 1
> MPI process
> Completed test examples
> 
> **************************************************************************************************************************
> 
> 
> 
> 
>