installation problems in mac machine

Mon Dec 21 15:34:02 CST 2009

When I run "make all", I saw many warnings like
---
f90_fwrap.F:124.72:

      subroutine F90Array2dCreateScalar(array,start1,len1,              
                                                                        1
Warning: Line truncated at (1)
f90_fwrap.F:130.72:

      real(kind=selected_real_kind(10)), target ::                      
---

It seems the it does not support f90. I smell something wrong, am I right? 
I installed the xcode and gfortran in the mac machine.

On Dec 21 2009, petsc-users-request at mcs.anl.gov wrote:

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>Today's Topics:
>
>   1. installation problems in mac machine (hxie at umn.edu)
>   2. Re: installation problems in mac machine (Satish Balay)
>   3. Re: installation problems in mac machine (Dominik Szczerba)
>   4. Re: installation problems in mac machine (Matthew Knepley)
>   5. Re: installation problems in mac machine (Satish Balay)
>   6. Re: installation problems in mac machine (Dominik Szczerba)
>   7. Re: installation problems in mac machine (Matthew Knepley)
>
>
>----------------------------------------------------------------------
>
>Message: 1
>Date: 21 Dec 2009 15:04:59 -0600
>From: hxie at umn.edu
>Subject: installation problems in mac machine
>To: petsc-users at mcs.anl.gov
>Message-ID: <Gophermail.2.0.0912211504590.28258 at vs-w.tc.umn.edu>
>Content-Type: text/plain; format=flowed; charset=UTF-8
>
>Hi,
>
>My operation system is Mac OS X 10.6.2. I unzip the petsc under 
>/usr/local/petsc-3.0.0-p10.
>I use the following to configure petsc.
>-------
> sudo ./config/configure.py --CFLAGS=-O3 --FFLAGS=-O3 
>--with-mpi-dir=/usr/local/mpich2-1.2.1 --with-fortran --with-shared=0 
>--with-fc=gfortran
>-------
>
>And I run the following commands:
>----
>export PETS_ARCH=darwin10.2.0-c-debug;
>PETSC_DIR=/usr/local/petsc-3.0.0-p10; export PETSC_DIR
>----
>
>When I run " sudo make all", it gives some errors:
>-----
>makefile:15: /conf/base: No such file or directory
>makefile:16: /conf/test: No such file or directory
>make: *** No rule to make target `/conf/test'.  Stop.
>-----
>
>It seems it cannot find the PETSC_DIR. (I use x11. "echo $SHELL" gets 
>"/bin/bash")
>Do I need to add "PETSC_DIR = /usr/local/petsc-3.0.0-p10" in the makefile 
>file? Thanks.
>
>Bests,
>Hui
>
>
>
>
>
>------------------------------
>
>Message: 2
>Date: Mon, 21 Dec 2009 15:10:00 -0600 (CST)
>From: Satish Balay <balay at mcs.anl.gov>
>Subject: Re: installation problems in mac machine
>To: PETSc users list <petsc-users at mcs.anl.gov>
>Message-ID: <alpine.LFD.2.00.0912211507000.2266 at asterix>
>Content-Type: TEXT/PLAIN; charset=US-ASCII
>
>Perhaps 'sudo' is not proegating PETSC_DIR,PETSC_ARCH variables
>properly?
>
>Try 'sudo /bin/bash' and do the whole install in that shell.
>
>BTW: you have a typo with PETSC_ARCH further down..  And we recommend
>using COPTFLAGS, FOPTFLAGS --with-debugging=0 for optimziation builds.
>
>Satish
>
>On Mon, 21 Dec 2009, hxie at umn.edu wrote:
>
>> Hi,
>> 
>> My operation system is Mac OS X 10.6.2. I unzip the petsc under
>> /usr/local/petsc-3.0.0-p10.
>> I use the following to configure petsc.
>> -------
>> sudo ./config/configure.py --CFLAGS=-O3 --FFLAGS=-O3
>> --with-mpi-dir=/usr/local/mpich2-1.2.1 --with-fortran --with-shared=0
>> --with-fc=gfortran
>> -------
>> 
>> And I run the following commands:
>> ----
>> export PETS_ARCH=darwin10.2.0-c-debug;
>> PETSC_DIR=/usr/local/petsc-3.0.0-p10; export PETSC_DIR
>> ----
>> 
>> When I run " sudo make all", it gives some errors:
>> -----
>> makefile:15: /conf/base: No such file or directory
>> makefile:16: /conf/test: No such file or directory
>> make: *** No rule to make target `/conf/test'.  Stop.
>> -----
>> 
>> It seems it cannot find the PETSC_DIR. (I use x11. "echo $SHELL" gets
>> "/bin/bash")
>> Do I need to add "PETSC_DIR = /usr/local/petsc-3.0.0-p10" in the makefile
>> file? Thanks.
>> 
>> Bests,
>> Hui
>> 
>> 
>> 
>> 
>
>
>
>------------------------------
>
>Message: 3
>Date: Mon, 21 Dec 2009 22:13:56 +0100
>From: Dominik Szczerba <dominik at itis.ethz.ch>
>Subject: Re: installation problems in mac machine
>To: PETSc users list <petsc-users at mcs.anl.gov>
>Message-ID: <4B2FE514.2070900 at itis.ethz.ch>
>Content-Type: text/plain; charset=US-ASCII
>
>-----BEGIN PGP SIGNED MESSAGE-----
>Hash: SHA1
>
>Why use sudo in the first place?
>I am not a mac user, but normally on unix sudo is the last thing you
>want to use during everyday work (provided that you are at all allowed
>to use it).
>
>Dominik
>
>Satish Balay wrote:
>> Perhaps 'sudo' is not proegating PETSC_DIR,PETSC_ARCH variables
>> properly?
>> 
>> Try 'sudo /bin/bash' and do the whole install in that shell.
>> 
>> BTW: you have a typo with PETSC_ARCH further down..  And we recommend
>> using COPTFLAGS, FOPTFLAGS --with-debugging=0 for optimziation builds.
>> 
>> Satish
>> 
>> On Mon, 21 Dec 2009, hxie at umn.edu wrote:
>> 
>>> Hi,
>>>
>>> My operation system is Mac OS X 10.6.2. I unzip the petsc under
>>> /usr/local/petsc-3.0.0-p10.
>>> I use the following to configure petsc.
>>> -------
>>> sudo ./config/configure.py --CFLAGS=-O3 --FFLAGS=-O3
>>> --with-mpi-dir=/usr/local/mpich2-1.2.1 --with-fortran --with-shared=0
>>> --with-fc=gfortran
>>> -------
>>>
>>> And I run the following commands:
>>> ----
>>> export PETS_ARCH=darwin10.2.0-c-debug;
>>> PETSC_DIR=/usr/local/petsc-3.0.0-p10; export PETSC_DIR
>>> ----
>>>
>>> When I run " sudo make all", it gives some errors:
>>> -----
>>> makefile:15: /conf/base: No such file or directory
>>> makefile:16: /conf/test: No such file or directory
>>> make: *** No rule to make target `/conf/test'.  Stop.
>>> -----
>>>
>>> It seems it cannot find the PETSC_DIR. (I use x11. "echo $SHELL" gets
>>> "/bin/bash")
>>> Do I need to add "PETSC_DIR = /usr/local/petsc-3.0.0-p10" in the 
>>> makefile
>>> file? Thanks.
>>>
>>> Bests,
>>> Hui
>>>
>>>
>>>
>>>
>> 
>
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>
>------------------------------
>
>Message: 4
>Date: Mon, 21 Dec 2009 15:15:27 -0600
>From: Matthew Knepley <knepley at gmail.com>
>Subject: Re: installation problems in mac machine
>To: PETSc users list <petsc-users at mcs.anl.gov>
>Message-ID:
>	<a9f269830912211315x3b732653ke6e9d6dee2130b6d at mail.gmail.com>
>Content-Type: text/plain; charset="iso-8859-1"
>
> On Mon, Dec 21, 2009 at 3:13 PM, Dominik Szczerba 
> <dominik at itis.ethz.ch>wrote:
>
>> -----BEGIN PGP SIGNED MESSAGE-----
>> Hash: SHA1
>>
>> Why use sudo in the first place?
>> I am not a mac user, but normally on unix sudo is the last thing you
>> want to use during everyday work (provided that you are at all allowed
>> to use it).
>>
>
>Not sure why you would think that. In fact, sudo is the safe way to do
>things
>and recommended for everyday usage.
>
>  Matt
>
>
>> Dominik
>>
>> Satish Balay wrote:
>> > Perhaps 'sudo' is not proegating PETSC_DIR,PETSC_ARCH variables
>> > properly?
>> >
>> > Try 'sudo /bin/bash' and do the whole install in that shell.
>> >
>> > BTW: you have a typo with PETSC_ARCH further down..  And we recommend
>> > using COPTFLAGS, FOPTFLAGS --with-debugging=0 for optimziation builds.
>> >
>> > Satish
>> >
>> > On Mon, 21 Dec 2009, hxie at umn.edu wrote:
>> >
>> >> Hi,
>> >>
>> >> My operation system is Mac OS X 10.6.2. I unzip the petsc under
>> >> /usr/local/petsc-3.0.0-p10.
>> >> I use the following to configure petsc.
>> >> -------
>> >> sudo ./config/configure.py --CFLAGS=-O3 --FFLAGS=-O3
>> >> --with-mpi-dir=/usr/local/mpich2-1.2.1 --with-fortran --with-shared=0
>> >> --with-fc=gfortran
>> >> -------
>> >>
>> >> And I run the following commands:
>> >> ----
>> >> export PETS_ARCH=darwin10.2.0-c-debug;
>> >> PETSC_DIR=/usr/local/petsc-3.0.0-p10; export PETSC_DIR
>> >> ----
>> >>
>> >> When I run " sudo make all", it gives some errors:
>> >> -----
>> >> makefile:15: /conf/base: No such file or directory
>> >> makefile:16: /conf/test: No such file or directory
>> >> make: *** No rule to make target `/conf/test'.  Stop.
>> >> -----
>> >>
>> >> It seems it cannot find the PETSC_DIR. (I use x11. "echo $SHELL" gets
>> >> "/bin/bash")
>> >> Do I need to add "PETSC_DIR = /usr/local/petsc-3.0.0-p10" in the
>> makefile
>> >> file? Thanks.
>> >>
>> >> Bests,
>> >> Hui
>> >>
>> >>
>> >>
>> >>
>> >
>>
>> -----BEGIN PGP SIGNATURE-----
>> Version: GnuPG v1.4.9 (GNU/Linux)
>>
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>> KfUAn1kP90FbNBvFZNsvkIjNnEv4ovJX
>> =KArD
>> -----END PGP SIGNATURE-----
>>
>
>
>
>