Help! Installing PETSc?

Bin xubinbin2004 at gmail.com
Wed Mar 14 00:56:21 CDT 2007


Hello,

I am trying to install PETSc on one of the workstations in my university. I
use the following commands for configuration:
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~

 config/configure.py \
>
> --with-cc=mpicc \
>
> --with-fc=mpif90 \
>
> --with-mpi-dir=/opt/hpmpi/lib/linux_amd64/ \
>
> --with-mpi-shared=yes \
>
> LIBS=-lpgf90rtl \
>
> --with-debugging=yes \
>
> --with-superlu=yes \
>
> --with-superlu-dir=/usr/apps/src/superlu/SuperLU_3.0 \
>
> --download-superlu=no \
>
> --with-superlu_dist=yes \
>
> --with-superlu_dist-dir=/usr/apps/src/superlu/SuperLU_DIST_2.0 \
>
> --download-superlu_dist=no \
>
> --with-batch
>
> After this I got a message saying that:

Since your compute nodes require use of a batch system or mpirun you must:

> 1) Submit ./conftest to 1 processor of your batch system or system you are
>
>   cross-compiling for; this will generate the file reconfigure
>
>  2) Run "python reconfigure" (to complete the configure process).
>
So I tyoed:

mpirun -np 1 conftest

and got the following error message:

> *************************************************************
>
> *mpid: MPI BUG: execvp failed: Cannot execute conftest: No such file or
> directory*
>
> *MPI Application rank 0 exited before MPI_Init() with status 1*
>
> **************************************************************
>
> I found that there is only conftest.o !
>
> Can anybody help me?
>
> Thanks a lot.
>
> >
> >
> > >
> > >
> > > >
>
> --
> Yours truly,
>
> Bin Xu
>
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