PETSc and gfortran

[Satish Balay]

Can you reproduce this with a PETSc example?

make test

Satish

On Wed, 10 Jan 2007, Paul T. Bauman wrote:

> Hello,
> 
> Has anyone had any experience using PETSc and gfortran together?  My code
> compiles, but when I run it, it crashes with the following error (mac Tiger
> 10.4.8, power pc, latest build of gfortran, MPICH2, petsc 2.3.2):
> 
> [0]PETSC ERROR:
> ------------------------------------------------------------------------
> [0]PETSC ERROR: Caught signal number 10 BUS: Bus Error, possibly illegal
> memory access
> [0]PETSC ERROR: Try option -start_in_debugger or -on_error_attach_debugger
> [0]PETSC ERROR: or see
> http://www.mcs.anl.gov/petsc/petsc-as/documentation/troubleshooting.html#Signal[0]PETSC
> ERROR: or try http://valgrind.org on linux or man libgmalloc on Apple to find
> memory corruption errors
> [0]PETSC ERROR: likely location of problem given in stack below
> [0]PETSC ERROR: ---------------------  Stack Frames
> ------------------------------------
> [0]PETSC ERROR: Note: The EXACT line numbers in the stack are not available,
> [0]PETSC ERROR:       INSTEAD the line number of the start of the function
> [0]PETSC ERROR:       is given.
> [0]PETSC ERROR: --------------------- Error Message
> ------------------------------------
> [0]PETSC ERROR: Signal received!
> [0]PETSC ERROR:
> ------------------------------------------------------------------------
> [0]PETSC ERROR: Petsc Release Version 2.3.2, Patch 8, Tue Jan  2 14:33:59 PST
> 2007 HG revision: ebeddcedcc065e32fc252af32cf1d01ed4fc7a80
> [0]PETSC ERROR: See docs/changes/index.html for recent updates.
> [0]PETSC ERROR: See docs/faq.html for hints about trouble shooting.
> [0]PETSC ERROR: See docs/index.html for manual pages.
> [0]PETSC ERROR:
> ------------------------------------------------------------------------
> [0]PETSC ERROR: EXEC/shrink_tao on a Apple_Pow named
> dhcp-67-30.ices.utexas.edu by pbauman Wed Jan 10 17:20:03 2007
> [0]PETSC ERROR: Libraries linked from
> /Users/pbauman/LIBRARIES/PETSC/petsc-2.3.2-p8/lib/Apple_PowerPC_Tiger_Debug
> [0]PETSC ERROR: Configure run at Tue Jan  9 15:42:42 2007
> [0]PETSC ERROR: Configure options --with-shared=0 --with-clanguage=C++
> --with-mpi-dir=/Users/pbauman/LIBRARIES/MPICH/mpich2-1.0.5_Apple_PowerPC_Tiger_gcc_gfortran
> --with-blas-lapack-dir=/Users/pbauman/LIBRARIES/PETSC/petsc-2.3.2-p8/externalpackages/fblaslapack/Apple_PowerPC_Tiger_Debug/
> [0]PETSC ERROR:
> ------------------------------------------------------------------------
> [0]PETSC ERROR: User provided function() line 0 in unknown directory unknown
> file
> [cli_0]: aborting job:
> application called MPI_Abort(MPI_COMM_WORLD, 59) - process 0
> rank 0 in job 2  dhcp-67-30.ices.utexas.edu_50482   caused collective abort of
> all ranks
>  exit status of rank 0: return code 59
> make: *** [run_shrink_tao_tr] Error 59
> 
> This happens at the very beginning of the code (I put a write statement in at
> the first line of the program and nothing came out).  This code runs
> successfully on linux with intel compilers. I'm sure the problem is somehow
> with gfortran/my build, I'm just not sure where to begin with this kind of
> problem, so I thought I'd see if anyone had a similar experience.
> 
> Thanks,
> 
> Paul
> 
>