[petsc-dev] issue with v3.21.5 build

[Matthew Knepley]

On Mon, Apr 28, 2025 at 10:02 PM Satish Balay <balay.anl at fastmail.org>
wrote:

> What do you have for:
>
> clang --version
>
> Try:
>
> ./configure COPTFLAGS=-O3 CXXOPTFLAGS=-O3 FOPTFLAGS="-O3
> -Wno-unused-function -fallow-argument-mismatch" \
> --with-debugging=no --download-mpich=
> https://urldefense.us/v3/__https://www.mpich.org/static/downloads/4.3.0/mpich-4.3.0.tar.gz__;!!G_uCfscf7eWS!Y7WkvcknrcBQzlXMtxbp21gd0sxBKkyBWbD2QnmJB4af9lkMqLbYYkA6d9BUlaOEUZk6aNDiP8a6xD4eqstB$  \
> --download-hdf5=yes --with-hdf5-fortran-bindings=yes
> --download-fblaslapack=yes \
> --download-metis=yes --download-parmetis=yes \
> CC=gcc-14 CXX=g++-14 FC=gfortran-14 --download-make=yes \
> --download-cmake=
> https://urldefense.us/v3/__https://gitlab.kitware.com/cmake/cmake/-/archive/v3.31.7/cmake-v3.31.7.tar.gz__;!!G_uCfscf7eWS!Y7WkvcknrcBQzlXMtxbp21gd0sxBKkyBWbD2QnmJB4af9lkMqLbYYkA6d9BUlaOEUZk6aNDiP8a6xFZqIY7u$ 
> \
> --download-cmake-cc=clang --download-cmake-cxx=clang++
>

You could use clang. Your g++ is broken:

Error when bootstrapping CMake:

Problem while running make

---------------------------------------------

Log of errors:
/Users/hymanjd/src/petsc/arch-darwin-c-debug/externalpackages/cmake-3.29.0/Bootstrap.cmk/cmake_bootstrap.log

---------------------------------------------

stdout:

In file included from
/opt/homebrew/Cellar/gcc/14.2.0_1/include/c++/14/ext/string_conversions.h:43,

                 from
/opt/homebrew/Cellar/gcc/14.2.0_1/include/c++/14/bits/basic_string.h:4154,

                 from
/opt/homebrew/Cellar/gcc/14.2.0_1/include/c++/14/string:54,

                 from
/Users/hymanjd/src/petsc/arch-darwin-c-debug/externalpackages/cmake-3.29.0/Source/cmTimestamp.h:9,

                 from
/Users/hymanjd/src/petsc/arch-darwin-c-debug/externalpackages/cmake-3.29.0/Source/cmTimestamp.cxx:15:

/opt/homebrew/Cellar/gcc/14.2.0_1/include/c++/14/cstdlib:141:11: error:
'at_quick_exit' has not been declared in '::'

  141 |   using ::at_quick_exit;

      |           ^~~~~~~~~~~~~

/opt/homebrew/Cellar/gcc/14.2.0_1/include/c++/14/cstdlib:164:11: error:
'quick_exit' has not been declared in '::'

  164 |   using ::quick_exit;

      |           ^~~~~~~~~~

make: *** [cmTimestamp.o] Error 1

make: *** Waiting for unfinished jobs....

                      Error running configure on CMAKE: Could not execute
"['./configure --prefix=/Users/hymanjd/src/petsc/arch-darwin-c-debug
--parallel=8 CC="/opt/homebrew/bin/gcc-14" CXX="/opt/homebrew/bin/g++-14"
-- -DCMAKE_USE_OPENSSL=OFF']":

Anything that includes <string> looks like it will break.

  Thanks,

     Matt

Satish
>
> On Mon, 28 Apr 2025, Jeffrey Hyman wrote:
>
> > Thanks, I'll give it a spin and let you know how it goes.
> >
> > JDH
> >
> > On Mon, Apr 28, 2025 at 8:43 PM Matthew Knepley <knepley at gmail.com>
> wrote:
> >
> > > On Mon, Apr 28, 2025 at 8:34 PM Jeffrey Hyman <hymanjd at gmail.com>
> wrote:
> > >
> > >> Hi,
> > >>
> > >> I am trying to build v3.21.5 to use with pflotran. I'm running into
> > >> issues with cmake. configure log attached.  Any suggestions?
> > >>
> > >
> > > The documentation could be clearer here. We cannot use the PETSc
> compilers
> > > to build CMake since it explicitly does not want MPI. Thus you need to
> > > specify them yourself. That means you would need
> > >
> > >   --download-cmake-cc=/opt/homebrew/bin/gcc-14
> > > --download-cmake-cxx=/opt/homebrew/bin/g++-14
> > >
> > >   Thanks,
> > >
> > >      Matt
> > >
> > >
> > >> Thanks for the help,
> > >> Jeffrey
> > >>
> > >>
> > >
> > > --
> > > What most experimenters take for granted before they begin their
> > > experiments is infinitely more interesting than any results to which
> their
> > > experiments lead.
> > > -- Norbert Wiener
> > >
> > >
> https://urldefense.us/v3/__https://www.cse.buffalo.edu/*knepley/__;fg!!G_uCfscf7eWS!bZa6EMKsRCbKBAnduL8Vva4vRPvbjUsz_v4OKJW8-c8D8gQcN4fZPfrAaQfZ37j1kQzigfg-TVDeQNOczHyI$
> > > <
> https://urldefense.us/v3/__http://www.cse.buffalo.edu/*knepley/__;fg!!G_uCfscf7eWS!bZa6EMKsRCbKBAnduL8Vva4vRPvbjUsz_v4OKJW8-c8D8gQcN4fZPfrAaQfZ37j1kQzigfg-TVDeQKP18rKz$
> >
> > >
> >



-- 
What most experimenters take for granted before they begin their
experiments is infinitely more interesting than any results to which their
experiments lead.
-- Norbert Wiener

https://urldefense.us/v3/__https://www.cse.buffalo.edu/*knepley/__;fg!!G_uCfscf7eWS!Y7WkvcknrcBQzlXMtxbp21gd0sxBKkyBWbD2QnmJB4af9lkMqLbYYkA6d9BUlaOEUZk6aNDiP8a6xGBclvbD$  <https://urldefense.us/v3/__http://www.cse.buffalo.edu/*knepley/__;fg!!G_uCfscf7eWS!Y7WkvcknrcBQzlXMtxbp21gd0sxBKkyBWbD2QnmJB4af9lkMqLbYYkA6d9BUlaOEUZk6aNDiP8a6xBWziDNd$ >
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