[petsc-dev] building with MKL
Mark Adams
mfadams at lbl.gov
Sat Jun 30 10:50:10 CDT 2018
I am configuring with MKL:
'--with-blas-lapack-dir=/opt/intel/compilers_and_libraries_2018.1.163/linux/mkl/lib/intel64_lin',
'--with-mkl_pardiso-dir=/opt/intel/compilers_and_libraries_2018.1.163/linux/mkl/lib/intel64_lin',
and get this error (appended). It is looking for libmkl_intel.a but this is
what there is:
08:46 cori07 maint *= ~/petsc_install/petsc/src/snes/examples/tutorials$ ll
/opt/intel/compilers_and_libraries_2018.1.163/linux/mkl/lib/intel64_lin/libmkl_inte*
-rw-r--r-- 1 root root 22133402 Oct 6 2017
/opt/intel/compilers_and_libraries_2018.1.163/linux/mkl/lib/intel64_lin/libmkl_intel_ilp64.a
-rwxr-xr-x 1 root root 9783841 Oct 6 2017
/opt/intel/compilers_and_libraries_2018.1.163/linux/mkl/lib/intel64_lin/libmkl_intel_ilp64.so
-rw-r--r-- 1 root root 23254666 Oct 6 2017
/opt/intel/compilers_and_libraries_2018.1.163/linux/mkl/lib/intel64_lin/libmkl_intel_lp64.a
-rwxr-xr-x 1 root root 10567885 Oct 6 2017
/opt/intel/compilers_and_libraries_2018.1.163/linux/mkl/lib/intel64_lin/libmkl_intel_lp64.so
-rw-r--r-- 1 root root 49087274 Oct 6 2017
/opt/intel/compilers_and_libraries_2018.1.163/linux/mkl/lib/intel64_lin/libmkl_intel_thread.a
-rwxr-xr-x 1 root root 37230319 Oct 6 2017
/opt/intel/compilers_and_libraries_2018.1.163/linux/mkl/lib/intel64_lin/libmkl_intel_thread.so
I would guess I want to add and LDFLAGS="lmkl_intel_thread" maybe? I want
to use OpenMP.
Thanks,
Mark
Pushing language C
Popping language C
Executing: cc -o /tmp/petsc-ZL05ng/config.libraries/conftest -g -O0
-hcpu=mic-knl -qopenmp-simd -fopenmp
/tmp/petsc-ZL05ng/config.libraries/conftest.o
-Wl,-rpath,/opt/intel/compilers_and_libraries_2018.1.163/linux/mkl/lib/intel64_lin
-L/opt/intel/compilers_and_libraries_2018.1.163/linux/mkl/lib/intel64_lin
-lmkl_intel -lmkl_core -lmkl_gnu_thread -lgomp -ldl -lpthread -lstdc++ -ldl
Possible ERROR while running linker: exit code 256
stderr:
/usr/lib64/gcc/x86_64-suse-linux/4.8/../../../../x86_64-suse-linux/bin/ld:
cannot find -lmkl_intel
Popping language C
Unknown name mangling in BLAS/LAPACK
**** Configure header /tmp/petsc-ZL05ng/confdefs.h ****
#if !defined(INCLUDED_UNKNOWN)
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