[petsc-dev] MatAssembly and VecAssembly
Barry Smith
bsmith at mcs.anl.gov
Fri Oct 20 17:35:36 CDT 2017
> On Oct 20, 2017, at 5:33 PM, Kong, Fande <fande.kong at inl.gov> wrote:
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> On Fri, Oct 20, 2017 at 4:24 PM, Barry Smith <bsmith at mcs.anl.gov> wrote:
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> > On Oct 20, 2017, at 12:17 PM, Kong, Fande <fande.kong at inl.gov> wrote:
> >
> > How about to do a global check (MPI_Allreduce)?
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> Kill you for large number of processes.
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> > If we do not set values at all and the matrix is already assembled, we just return without doing anything?
> >
> > How expensive, in the current implementation, to call MatAssemblyBegin/End if there are no any stashed data? Is it so cheap that we can just ignore it?
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> It requires at least one global reduction.
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> So, this global reduction is cheaper than MPI_Allreduce? Or they are similar.
No it is not cheaper, it is the same thing.
You need to eliminate unneeded AssemblyBegin/End in MOOSE. That is the only corrective action that can take place.
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> > I am asking because we call MatAssemblyBegin/End so often in MOOSE. I want to make sure this is not going to bring up any performance issue.
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> You need to check each use in MOOSE and see WHY it is being called. If no reason then don't call.
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> Good point.
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> Fande,
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> Barry
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> >
> >
> > Fande,
> >
> > On Fri, Oct 20, 2017 at 11:08 AM, Barry Smith <bsmith at mcs.anl.gov> wrote:
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> > One process sets a value in the matrix, the others do not. They all call MatAssemblyBegin(). Some processes will skip the assembly and hence the code will hang.
> >
> >
> > > On Oct 20, 2017, at 12:03 PM, Kong, Fande <fande.kong at inl.gov> wrote:
> > >
> > > Hi All,
> > >
> > > In Mat/VecAssemblyBegin/End, why we do not check if or not mat/vec is assembled. If mat/vec is already assembled, should we just return without doing anything?
> > >
> > > I think we have some particular reasons not to check if the matrix is assembled. I honestly do not know why.
> > >
> > > Thanks,
> > >
> > > Fande,
> >
> >
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