[petsc-dev] PETSc 3.8.2 and Sundials 3.0.0
Antonio Trande
anto.trande at gmail.com
Wed Nov 15 14:06:25 CST 2017
On 11/15/2017 08:58 PM, Matthew Knepley wrote:
> Do you have any idea what they changed the name of CVSpgmr to in 3.0?
>
> Matt
No, but release change-log
(https://computation.llnl.gov/projects/sundials/cvode) reports:
*Added generic SUNLINEARSOLVER module with eleven provided
implementations: dense, banded, LAPACK dense, LAPACK band, KLU,
SuperLU_MT, SPGMR, SPBCGS, SPTFQMR, SPFGMR, and PCG. These
implementations replicate previous SUNDIALS generic linear solvers in a
single object-oriented API.*
>
> On Wed, Nov 15, 2017 at 2:53 PM, Antonio Trande <anto.trande at gmail.com
> <mailto:anto.trande at gmail.com>> wrote:
>
> Hi all.
>
> I can't build 'PETSc 3.8.*' with MPI against new 'Sundials-3.0.0':
>
> *******************************************************************************
> UNABLE to CONFIGURE with GIVEN OPTIONS (see configure.log
> for details):
> -------------------------------------------------------------------------------
> --with-sundials-lib=['-L/usr/lib64/openmpi/lib',
> '-lsundials_nvecparallel'] and
> --with-sundials-include=['/usr/include/openmpi-x86_64'] did not work
> *******************************************************************************
>
> configure.log reports something like that:
>
> Executing: /usr/lib64/openmpi/bin/mpicc -o
> /tmp/petsc-080_o1/config.libraries/conftest -Wl,-z,relro -Wl,-z,now
> -fPIC -O2 -g -pipe -Wall -Werror=format-security
> -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong
> --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -O3
> -Wl,-z,now -fPIC /tmp/petsc-080_o1/config.libraries/conftest.o
> -L/usr/lib64/openmpi/lib -lsundials_nvecparallel -lopenblas -lm -ldl
> Possible ERROR while running linker: exit code 256
> stderr:
> /tmp/petsc-080_o1/config.libraries/conftest.o: In function
> `_check_CVSpgmr':
> /tmp/petsc-080_o1/config.libraries/conftest.c:5: undefined reference to
> `CVSpgmr'
> collect2: error: ld returned 1 exit status
>
> 'configure.log' is attached.
>
> --
> --
> Antonio Trande
> sagitter AT fedoraproject dot org
> See my vCard.
>
>
>
>
> --
> What most experimenters take for granted before they begin their
> experiments is infinitely more interesting than any results to which
> their experiments lead.
> -- Norbert Wiener
>
> https://www.cse.buffalo.edu/~knepley/ <http://www.caam.rice.edu/~mk51/>
--
--
Antonio Trande
sagitter AT fedoraproject dot org
See my vCard.
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