[petsc-dev] Bump MOAB version?

Wed Feb 1 20:50:57 CST 2017

FYI, the PETSc tests that use MOAB passed using MOAB commit f862b4c on
my laptop, though when I had mpich debugging on there looks like there
may have been some memory leaks that don't appear in other PETSc
tests.  (log attached)

Cheers,
  Toby

On Wed, Feb 01, 2017 at 03:22:18AM +0530, Vijay S. Mahadevan wrote:
> Toby, thanks for the update. Yes, I recently updated the "petsc"
> branch in MOAB to make sure that v4.9.2 is merged. Some of these
> changes are needed for one of my upcoming PR's to improve DMMoab
> support. I however have been on some international travel and haven't
> found enough time to take care of this.
> 
> Iulian, can you create a tarball that corresponds to the HEAD in petsc
> branch (if not already available from the ftp site) ?
> 
> Vijay
> 
> PS: The macports errors are related to ESMF. They have their custom
> version of MOAB (4.6.x) and so I'm unsure whether the port needs the
> latest MOAB as its dependency.
> 
> On Wed, Feb 1, 2017 at 3:07 AM, Tobin Isaac <tisaac at uchicago.edu> wrote:
> >
> > The commit of MOAB that we use in MAOB.py doesn't compile in gcc6
> > due to c++14 compatibility issues [1].  I checked out the latest petsc
> > branch from their repo and it seems to compile.  Can we ask them to
> > host an updated tarball, too?
> >
> > [1] https://trac.macports.org/ticket/52427#comment:2
> >
> >   Toby
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# -------------
#   Summary    
# -------------
# FAILED 
# success 84/97 tests (86.6%)
# failed 0/97 tests (0.0%)
# todo 0/97 tests (0.0%)
# skip 13/97 tests (13.4%)
Wed Feb  1 13:19:36 CST 2017
******* Testing: testexamples_C *******
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******* Testing: testexamples_C_Info *******
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******* Testing: testexamples_C_NotSingle *******
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******* Testing: testexamples_C_X *******
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******* Testing: testexamples_Fortran *******
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******* Testing: testexamples_Fortran_NotSingle *******
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******* Testing: testexamples_F90_NotSingle *******
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******* Testing: testexamples_Fortran_NoComplex_NotSingle *******
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................
******* Testing: testexamples_C_NoComplex_NotSingle *******
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******* Testing: testexamples_TRIANGLE *******
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******* Testing: testexamples_TRIANGLE_HDF5 *******
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******* Testing: testexamples_HDF5 *******
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******* Testing: testexamples_MOAB *******
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******* Testing: testexamples_MOAB_HDF5 *******
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1a2,12
> [0] 8 at [0x0000556b72333340], ../src/util/procmap/local_proc.c[93]
> [1] 8 at [0x000055e1d81f2340], ../src/util/procmap/local_proc.c[93]
> [1] 8 at [0x000055e1d81f2290], ../src/util/procmap/local_proc.c[92]
> [1] 368 at [0x000055e1d81f1d10], ../src/mpi/comm/commutil.c[264]
> [1] 368 at [0x000055e1d81f0b00], ../src/mpi/comm/commutil.c[264]
> [1] 32 at [0x000055e1d81f0a40], ../src/mpid/ch3/src/mpid_vc.c[77]
> [0] 8 at [0x0000556b72333290], ../src/util/procmap/local_proc.c[92]
> [0] 368 at [0x0000556b72332d10], ../src/mpi/comm/commutil.c[264]
> [0] 368 at [0x0000556b72332b00], ../src/mpi/comm/commutil.c[264]
> [0] 368 at [0x0000556b72331b00], ../src/mpi/comm/commutil.c[264]
> [0] 32 at [0x0000556b72331a40], ../src/mpid/ch3/src/mpid_vc.c[77]
/home/tisaac/srv/git/petsc/src/ksp/ksp/examples/tutorials
Possible problem with runex35_2, diffs above 
=========================================
.............................................................................................................43a44,54
> [1] 8 at [0x000056516a854340], ../src/util/procmap/local_proc.c[93]
> [1] 8 at [0x000056516a854290], ../src/util/procmap/local_proc.c[92]
> [1] 368 at [0x000056516a853d10], ../src/mpi/comm/commutil.c[264]
> [1] 368 at [0x000056516a852b00], ../src/mpi/comm/commutil.c[264]
> [1] 32 at [0x000056516a852a40], ../src/mpid/ch3/src/mpid_vc.c[77]
> [0] 8 at [0x00005622ec108340], ../src/util/procmap/local_proc.c[93]
> [0] 8 at [0x00005622ec108290], ../src/util/procmap/local_proc.c[92]
> [0] 368 at [0x00005622ec107d10], ../src/mpi/comm/commutil.c[264]
> [0] 368 at [0x00005622ec107b00], ../src/mpi/comm/commutil.c[264]
> [0] 368 at [0x00005622ec106b00], ../src/mpi/comm/commutil.c[264]
> [0] 32 at [0x00005622ec106a40], ../src/mpid/ch3/src/mpid_vc.c[77]
/home/tisaac/srv/git/petsc/src/ts/examples/tutorials
Possible problem with ex35_2, diffs above
=========================================
...................................................................................................
******* Testing: testexamples_PTSCOTCH *******
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******* Testing: testexamples_CTETGEN *******
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******* Testing: testexamples_METIS *******
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******* Testing: testexamples_PARMETIS *******
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******* Testing: testexamples_Cxx *******
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******* Testing: testexamples_F90 *******
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******* Testing: testexamples_F90_NoComplex *******
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******* Testing: testexamples_F2003 *******
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******* Testing: testexamples_Fortran_NoComplex *******
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******* Testing: testexamples_C_NoComplex *******
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******* Testing: testexamples_DOUBLEINT32 *******
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******* Testing: testexamples_Fortran_DOUBLEINT32 *******
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Wed Feb  1 13:34:55 CST 2017
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