[petsc-dev] problem in MatMerge_Seq

[Barry Smith]

  Hong,

  MatMerge_Seq() is not doing preallocation nor setting the flag that allows improper preallocation

-*- mode: compilation; default-directory: "/Users/barrysmith/Src/petsc-dev/src/mat/examples/tests/" -*-
Compilation started at Fri Mar  2 16:52:06

make PETSC_DIR=/Users/barrysmith/Src/petsc-dev PETSC_ARCH=arch-gnu runex95
[0]PETSC ERROR: --------------------- Error Message ------------------------------------
[0]PETSC ERROR: Argument out of range!
[0]PETSC ERROR: New nonzero at (0,0) caused a malloc!
[0]PETSC ERROR: ------------------------------------------------------------------------
[0]PETSC ERROR: Petsc Development HG revision: d35fa29f81218e6e5376faf87f3925c16b47cb76  HG Date: Thu Mar 01 19:13:43 2012 -0600
[0]PETSC ERROR: See docs/changes/index.html for recent updates.
[0]PETSC ERROR: See docs/faq.html for hints about trouble shooting.
[0]PETSC ERROR: See docs/index.html for manual pages.
[0]PETSC ERROR: ------------------------------------------------------------------------
[0]PETSC ERROR: ./ex95 on a arch-gnu named anlextwls003-010.wl.anl-external.org by barrysmith Fri Mar  2 16:52:06 2012
[0]PETSC ERROR: Libraries linked from /Users/barrysmith/Src/petsc-dev/arch-gnu/lib
[0]PETSC ERROR: Configure run at Thu Mar  1 20:56:05 2012
[0]PETSC ERROR: Configure options --download-blacs --download-fftw --download-hypre --download-metis --download-mpich --download-mumps --download-parmetis --download-ptscotch --download-scalapack --download-superlu --download-superlu_dist --download-yaml --with-shared-libraries PETSC_ARCH=arch-gnu
[0]PETSC ERROR: ------------------------------------------------------------------------
[0]PETSC ERROR: MatSetValues_MPIAIJ() line 506 in /Users/barrysmith/Src/petsc-dev/src/mat/impls/aij/mpi/mpiaij.c
[0]PETSC ERROR: [1]PETSC ERROR: --------------------- Error Message ------------------------------------
[1]PETSC ERROR: Argument out of range!
[1]PETSC ERROR: New nonzero at (0,0) caused a malloc!
[1]PETSC ERROR: ------------------------------------------------------------------------
[1]PETSC ERROR: Petsc Development HG revision: d35fa29f81218e6e5376faf87f3925c16b47cb76  HG Date: Thu Mar 01 19:13:43 2012 -0600
[1]PETSC ERROR: See docs/changes/index.html for recent updates.
[1]PETSC ERROR: See docs/faq.html for hints about trouble shooting.
[1]PETSC ERROR: See docs/index.html for manual pages.
[1]PETSC ERROR: ------------------------------------------------------------------------
[1]PETSC ERROR: ./ex95 on a arch-gnu named anlextwls003-010.wl.anl-external.org by barrysmith Fri Mar  2 16:52:06 2012
[1]PETSC ERROR: Libraries linked from /Users/barrysmith/Src/petsc-dev/arch-gnu/lib
[1]PETSC ERROR: Configure run at Thu Mar  1 20:56:05 2012
[1]PETSC ERROR: Configure options --download-blacs --download-fftw --download-hypre --download-metis --download-mpich --download-mumps --download-parmetis --download-ptscotch --download-scalapack --download-superlu --download-superlu_dist --download-yaml --with-shared-libraries PETSC_ARCH=arch-gnu
[1]PETSC ERROR: ------------------------------------------------------------------------
[1]PETSC ERROR: MatSetValues_MPIAIJ() line 506 in /Users/barrysmith/Src/petsc-dev/src/mat/impls/aij/mpi/mpiaij.c
[1]PETSC ERROR: MatSetValues() line 1141 in /Users/barrysmith/Src/petsc-dev/src/mat/interface/matrix.c
[1]PETSC ERROR: MatMerge_SeqsToMPINumeric() line 4548 in /Users/barrysmith/Src/petsc-dev/src/mat/impls/aij/mpi/mpiaij.c
[1]PETSC ERROR: MatMerge_SeqsToMPI() line 4848 in /Users/barrysmith/Src/petsc-dev/src/mat/impls/aij/mpi/mpiaij.c
[1]PETSC ERROR: main() line 41 in src/mat/examples/tests/ex95.c
application called MPI_Abort(MPI_COMM_WORLD, 63) - process 1
[cli_1]: aborting job:
application called MPI_Abort(MPI_COMM_WORLD, 63) - process 1
[2]PETSC ERROR: --------------------- Error Message ------------------------------------
[2]PETSC ERROR: Argument out of range!
[2]PETSC ERROR: New nonzero at (0,0) caused a malloc!
[2]PETSC ERROR: ------------------------------------------------------------------------
[2]PETSC ERROR: Petsc Development HG revision: d35fa29f81218e6e5376faf87f3925c16b47cb76  HG Date: Thu Mar 01 19:13:43 2012 -0600
[2]PETSC ERROR: See docs/changes/index.html for recent updates.
[2]PETSC ERROR: See docs/faq.html for hints about trouble shooting.
[2]PETSC ERROR: See docs/index.html for manual pages.
[2]PETSC ERROR: ------------------------------------------------------------------------
[2]PETSC ERROR: ./ex95 on a arch-gnu named anlextwls003-010.wl.anl-external.org by barrysmith Fri Mar  2 16:52:06 2012
[2]PETSC ERROR: Libraries linked from /Users/barrysmith/Src/petsc-dev/arch-gnu/lib
[2]PETSC ERROR: Configure run at Thu Mar  1 20:56:05 2012
[2]PETSC ERROR: Configure options --download-blacs --download-fftw --download-hypre --download-metis --download-mpich --download-mumps --download-parmetis --download-ptscotch --download-scalapack --download-superlu --download-superlu_dist --download-yaml --with-shared-libraries PETSC_ARCH=arch-gnu
[2]PETSC ERROR: ------------------------------------------------------------------------
[2]PETSC ERROR: MatSetValues_MPIAIJ() line 506 in /Users/barrysmith/Src/petsc-dev/src/mat/impls/aij/mpi/mpiaij.c
[2]PETSC ERROR: MatSetValues() line 1141 in /Users/barrysmith/Src/petsc-dev/src/mat/interface/matrix.c
[2]PETSC ERROR: MatMerge_SeqsToMPINumeric() line 4548 in /Users/barrysmith/Src/petsc-dev/src/mat/impls/aij/mpi/mpiaij.c
[2]PETSC ERROR: MatMerge_Seq
Compilation finished at Fri Mar  2 16:52:06