installation help

[Rob Latham]

On 08/26/2014 09:05 AM, Osman Tursun wrote:

> /usr/mpi/gcc/mvapich-1.1.0/bin/mpicc  -g -O2   -o ncmpigen main.o load.o
> escapes.o getfill.o init.o genlib.o ncmpigentab.o  -L../../lib -lpnetcdf
> ../../lib/libpnetcdf.a(subfile.o): In function `ncmpii_subfile_getput_vars':
> /home1/e1893122/workspace/parallel-netcdf-1.5.0/src/lib/subfile.c:762:
> undefined reference to `MPI_Type_get_extent'

mvapich-1.1.0 is quite old: one cannot even download it from the OSU 
page any longer.

pnetcdf tries to support MPI-1 implementations, and I guess we missed a 
spot, but you will be much better served by a newer MVAPICH.

==rob

> collect2: ld returned 1 exit status
> make[3]: *** [ncmpigen] Error 1
> make[3]: Leaving directory
> `/home1/e1893122/workspace/parallel-netcdf-1.5.0/src/utils/ncmpigen'
> make[2]: *** [ncmpigen] Error 2
> make[2]: Leaving directory
> `/home1/e1893122/workspace/parallel-netcdf-1.5.0/src/utils'
> make[1]: *** [utils] Error 2
> make[1]: Leaving directory
> `/home1/e1893122/workspace/parallel-netcdf-1.5.0/src'
> make: *** [install-src] Error 2
>
>
> --
> Best wishes
> Osman Tursun

-- 
Rob Latham
Mathematics and Computer Science Division
Argonne National Lab, IL USA