[Nek5000-users] How to run Nek5000 in cluster based on mpich?
nek5000-users at lists.mcs.anl.gov
nek5000-users at lists.mcs.anl.gov
Wed Jun 4 21:23:51 CDT 2014
Hi, Paul:
I read the nekbmpi file and find this:
mpiexec -np $2 ./nek5000 > $1.log.$2 &
so the nek5000 is executed by mpi. In mpich, the common way to run a executable program can be run as :
mpiexec -n XX ./nek5000
However, when I type this:
mpiexec -n 32 ./nek5000 > turbChannel.log &
error returns like:
Fortran runtime error: File './NEK.rea' does not exist
Best reguards
Xianbei
At 2014-06-04 11:20:52, nek5000-users at lists.mcs.anl.gov wrote:
Hi Xianbei,
Have a look at the nekbmpi script and modify to match the job submission
procedure on your cluster.
Paul
From:nek5000-users-bounces at lists.mcs.anl.gov [nek5000-users-bounces at lists.mcs.anl.gov] on behalf of nek5000-users at lists.mcs.anl.gov [nek5000-users at lists.mcs.anl.gov]
Sent: Wednesday, June 04, 2014 9:34 AM
To: Nek5000
Subject: [Nek5000-users] How to run Nek5000 in cluster based on mpich?
Hi,all:
I have just built a small cluster of computers, based on mpich.I have tested the capability of this cluster, each node can be called freely. Now I want to do my simulation in it, however, I don't know how to run Nek. As known, on only 1 computer, one can do like this:
nekmpi XXX X
or
nekbmpi XXX X
while this is not the case in the cluster! I believe most of you have tried this, I'll appreciate if anyone can give me some advice.
Best regards
Xianbei
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